RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SETD3Q86TU7 594 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-214ENST00000477152 GATAD2AQ86YP4 633 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 TRIM59Q8IWR1 403 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 APCDD1Q8J025 514 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 PIP4K2CQ8TBX8 421 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 SLCO3A1Q9UIG8 710 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 MAN1B1Q9UKM7 699 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 MKL2Q9ULH7 1088 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 CLCA2Q9UQC9 943 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 CABIN1Q9Y6J0 2220 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 GTPBP10A4D1E9 387 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 PLK4O00444 970 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 IGLV3-25P01717 112 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 FYNP06241 537 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 PGRP06401 933 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 RHOCP08134 193 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 GLDCP23378 1020 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ACP1P24666 158 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ACADVLP49748 655 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 GEMIN4P57678 1058 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SLC20A2Q08357 652 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 PDCLQ13371 301 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 RTP5Q14D33 572 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 DLG2Q15700 870 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 NKG7Q16617 165 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 HES3Q5TGS1 186 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SYPL2Q5VXT5 272 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 RETSATQ6NUM9 610 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 DENND1BQ6P3S1 775 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ZNF783Q6ZMS7 281 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ARHGEF19Q8IW93 802 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 DEFB106AQ8N104 65 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 AADATQ8N5Z0 425 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ATP11CQ8NB49 1132 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 TMIEQ8NEW7 156 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 LMO3Q8TAP4 145 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 GRAMD1AQ96CP6 724 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ORAI3Q9BRQ5 295 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ABCG4Q9H172 646 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 MTG2Q9H4K7 406 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 RETREG1Q9H6L5 497 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 WDCPQ9H6R7 721 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 APEX2Q9UBZ4 518 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 CACNA1GO43497 2377 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 LAMA1P25391 3075 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SHROOM3Q8TF72 1996 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SYNJ2BP-COX16A0A087WUM0 186 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 TEX51A0A1B0GUA7 166 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 FAM149AA5PLN7 773 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 DAB1O75553 588 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 HNRNPA2B1P22626 353 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 COL8A1P27658 744 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SLC6A3Q01959 620 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 TARDBPQ13148 414 aaKnown RBP eCLIP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 NME3Q13232 169 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 AUHQ13825 339 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 EXOC3L4Q17RC7 722 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SOWAHCQ53LP3 525 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ZBTB37Q5TC79 503 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 ISM2Q6H9L7 571 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 FBXL22Q6P050 247 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 LAYNQ6UX15 382 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 MMS22LQ6ZRQ5 1243 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SH2D3CQ8N5H7 860 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 TMEM35BQ8NCS4 154 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 FGF11Q92914 225 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 KAT5Q92993 513 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 DEPDC7Q96QD5 511 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SLC2A13Q96QE2 648 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 PRMT1Q99873 361 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 FEM1AQ9BSK4 669 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 KLHL11Q9NVR0 708 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 COX16Q9P0S2 106 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 SERGEFQ9UGK8 458 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 IPO11Q9UI26 975 aaKnown RBP7.42□□□□□ -1.22
BRCA1-214ENST00000477152 VANGL2Q9ULK5 521 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 IGF2RP11717 2491 aa7.42□□□□□ -1.22
BRCA1-214ENST00000477152 CXorf51AA0A1B0GTR3 108 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 A6NNZ2 444 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 M0QYT0 321 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 KPNA3O00505 521 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 PCDH8O95206 1070 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 WNT1P04628 370 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 GP1BAP07359 652 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 THEGLP0DJG4 465 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 MAT2AP31153 395 aaKnown RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 CHRNA3P32297 505 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 EIF2S3P41091 472 aaKnown RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 MTIF2P46199 727 aaKnown RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 STK19P49842 368 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 HNRNPKP61978 463 aaKnown RBP eCLIP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 SEMG2Q02383 582 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 MORC3Q14149 939 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms