RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 OR1N1Q8NGS0 311 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 ARRDC2Q8TBH0 407 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 HDAC7Q8WUI4 952 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 RFT1Q96AA3 541 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 LRRC46Q96FV0 321 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 PCDHAC1Q9H158 963 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 PLEKHA5Q9HAU0 1116 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 ZNF287Q9HBT7 754 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 CHST11Q9NPF2 352 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 CHPF2Q9P2E5 772 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 TRPC5Q9UL62 973 aaPredicted RBP0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 L1RE1Q9UN81 338 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 ANKRD6Q9Y2G4 727 aa0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 COPG1Q9Y678 874 aaKnown RBP0.72□□□□□ -2.29
RPL39P34-201ENST00000477141 TLDC2A0PJX2 215 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 J3KTA2 159 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 SOCS6O14544 535 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 CIDEAO60543 219 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 NDUFS7O75251 213 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 TIPRLO75663 272 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 SRGAP2BP0DMP2 458 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 HARSP12081 509 aaKnown RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 HOXB9P17482 250 aaPredicted RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 HOXC8P31273 242 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 PIGAP37287 484 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 LIMK2P53671 638 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 KRTAP10-10P60014 251 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 CAPSQ13938 189 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 LPIN1Q14693 890 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 MRNIPQ6NTE8 343 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 KIAA1324Q6UXG2 1013 aaKnown RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 NPM2Q86SE8 214 aaKnown RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 WDR5BQ86VZ2 330 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 ZC3HC1Q86WB0 502 aaKnown RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 MB21D2Q8IYB1 491 aaPredicted RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 PRPF38AQ8NAV1 312 aaKnown RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 OR2T6Q8NHC8 308 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 PARD3BQ8TEW8 1205 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 TM9SF4Q92544 642 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 ATOH1Q92858 354 aaPredicted RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 OMA1Q96E52 524 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 APIPQ96GX9 242 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 SENP5Q96HI0 755 aaPredicted RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 ST6GAL2Q96JF0 529 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 MSLNLQ96KJ4 702 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 XRN2Q9H0D6 950 aaKnown RBP eCLIP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 GPR83Q9NYM4 423 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 C1RLQ9NZP8 487 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 WBP11Q9Y2W2 641 aaKnown RBP0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 C2CD2Q9Y426 696 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 DAAM1Q9Y4D1 1078 aa0.71□□□□□ -2.3
RPL39P34-201ENST00000477141 PNMA6EA0A0J9YXQ4 647 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 A0A0U1RQF3 1178 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 HMX3A6NHT5 357 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 ZIC3O60481 467 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 VIPP01282 170 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 UBA1P22314 1058 aaKnown RBP0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 PRPH2P23942 346 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 SPOCK1Q08629 439 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 FAM27E3Q08E93 113 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 GRM4Q14833 912 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 AMZ1Q400G9 498 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 ATP13A5Q4VNC0 1218 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 TAF1BQ53T94 588 aaPredicted RBP0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 CCNYL2Q5T2Q4 361 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 PDSS1Q5T2R2 415 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 WDR73Q6P4I2 378 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 NHLRC1Q6VVB1 395 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 TRPT1Q86TN4 253 aaKnown RBP0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 KMT5CQ86Y97 462 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 CCDC105Q8IYK2 499 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 VPS52Q8N1B4 723 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 Q8N377 158 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 DDHD1Q8NEL9 900 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 C2CD4CQ8TF44 421 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 TBC1D22AQ8WUA7 517 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 ZNRF4Q8WWF5 429 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 LRRC1Q9BTT6 524 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 MECRQ9BV79 373 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 TMEM60Q9H2L4 133 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 TMEM30AQ9NV96 361 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 C2orf42Q9NWW7 574 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 EPHA6Q9UF33 1036 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 MAN1B1Q9UKM7 699 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 OSGIN2Q9Y236 505 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 EXOGQ9Y2C4 368 aaKnown RBP0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 ZBTB1Q9Y2K1 713 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 PAM16Q9Y3D7 125 aa0.7□□□□□ -2.3
RPL39P34-201ENST00000477141 ASTN2O75129 1339 aaPredicted RBP0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 C11orf97A0A1B0GVM6 126 aaPredicted RBP0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 A0A1W2PPI3 338 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 IFNL4K9M1U5 179 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 RASA4O43374 803 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 RFPL2O75678 378 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 HLA-DQA2P01906 255 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 KRT6AP02538 564 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 TFRCP02786 760 aaKnown RBP0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 KRT6BP04259 564 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 DHRS4L1P0CG22 281 aa0.69□□□□□ -2.3
RPL39P34-201ENST00000477141 CEACAM1P13688 526 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms