RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PAK4O96013 591 aaPredicted RBP21.41■■□□□ 1.02
LIME1-204ENST00000476183 SPINK2P20155 84 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 AKT2P31751 481 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 GJC1P36383 396 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 OVGP1Q12889 678 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 HADHQ16836 314 aaKnown RBP21.41■■□□□ 1.02
LIME1-204ENST00000476183 TC2NQ8N9U0 490 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 KLHDC7BQ96G42 594 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 NSMCE3Q96MG7 304 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 C1QTNF2Q9BXJ5 285 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 ERVMER34-1Q9H9K5 563 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 KLHL11Q9NVR0 708 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 ARID1BQ8NFD5 2236 aaPredicted RBP21.41■■□□□ 1.02
LIME1-204ENST00000476183 AKAP13Q12802 2813 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 EPG5Q9HCE0 2579 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 ANKRD36A6QL64 1941 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 THEGLP0DJG4 465 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 CSNK1DP48730 415 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 DPYSL3Q14195 570 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 ABI3BPQ7Z7G0 1075 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 GLRX5Q86SX6 157 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 SRLQ86TD4 932 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 CAMK1DQ8IU85 385 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 OR13H1Q8NG92 308 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 SLC35G2Q8TBE7 412 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 SAP25Q8TEE9 199 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 BMFQ96LC9 184 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 CNTNAP3BQ96NU0 1288 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 CINPQ9BW66 212 aaPredicted RBP21.4■■□□□ 1.02
LIME1-204ENST00000476183 CNTNAP3Q9BZ76 1288 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 SUV39H2Q9H5I1 410 aa21.4■■□□□ 1.02
LIME1-204ENST00000476183 RCOR3Q9P2K3 495 aaPredicted RBP21.4■■□□□ 1.02
LIME1-204ENST00000476183 MAP1BP46821 2468 aaKnown RBP21.4■■□□□ 1.02
LIME1-204ENST00000476183 SHROOM3Q8TF72 1996 aa21.39■■□□□ 1.02
LIME1-204ENST00000476183 TSPAN11A1L157 253 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 TMEM110-MUSTN1A8MSY1 372 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 NEMP1O14524 444 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 MAGEC1O60732 1142 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 FTH1P19P0C7X4 201 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 EPHA8P29322 1005 aaPredicted RBP21.39■■□□□ 1.01
LIME1-204ENST00000476183 RXRGP48443 463 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 SLC10A7Q0GE19 358 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 BNIP3Q12983 259 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 RFTN1Q14699 578 aaPredicted RBP21.39■■□□□ 1.01
LIME1-204ENST00000476183 ZSWIM9Q86XI8 627 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 GAS2L3Q86XJ1 694 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 SLC22A18ASQ8N1D0 253 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 KLF6Q99612 283 aaPredicted RBP21.39■■□□□ 1.01
LIME1-204ENST00000476183 CAAP1Q9H8G2 361 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 HS3ST3A1Q9Y663 406 aa21.39■■□□□ 1.01
LIME1-204ENST00000476183 ASPMQ8IZT6 3477 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 POM121BA6NF01 834 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 MAFKO60675 156 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 MAN1A1P33908 653 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 GRK6P43250 576 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 ARRB1P49407 418 aaPredicted RBP21.38■■□□□ 1.01
LIME1-204ENST00000476183 NSUN2Q08J23 767 aaKnown RBP eCLIP21.38■■□□□ 1.01
LIME1-204ENST00000476183 MESDQ14696 234 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 LBRQ14739 615 aaKnown RBP21.38■■□□□ 1.01
LIME1-204ENST00000476183 TMCO4Q5TGY1 634 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 KDM7AQ6ZMT4 941 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 SLCO6A1Q86UG4 719 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 PCDH19Q8TAB3 1148 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 HCAR2Q8TDS4 363 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 ZNF599Q96NL3 588 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 PSKH2Q96QS6 385 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 TUBGCP5Q96RT8 1024 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 TOR4AQ9NXH8 423 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 SEPT3Q9UH03 358 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 LRRK1Q38SD2 2015 aa21.38■■□□□ 1.01
LIME1-204ENST00000476183 TDRD6O60522 2096 aaKnown RBP21.37■■□□□ 1.01
LIME1-204ENST00000476183 TTC24A2A3L6 582 aaPredicted RBP21.37■■□□□ 1.01
LIME1-204ENST00000476183 YKT6O15498 198 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 HYAL3O43820 417 aaPredicted RBP21.37■■□□□ 1.01
LIME1-204ENST00000476183 MFSD11O43934 449 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 MMP20O60882 483 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 MTA2O94776 668 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 SERPINB6P35237 376 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 ZNF75DP51815 510 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 SGCGQ13326 291 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 GRM3Q14832 879 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 NCBP2-AS2Q69YL0 99 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 Q6ZSR6 202 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 KANSL1Q7Z3B3 1105 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 ZSCAN30Q86W11 494 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 PGBD5Q8N414 524 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 OXR1Q8N573 874 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 ATPAF2Q8N5M1 289 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 PNPLA1Q8N8W4 532 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 KCTD6Q8NC69 237 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 ASB12Q8WXK4 309 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 ZNF641Q96N77 438 aaPredicted RBP21.37■■□□□ 1.01
LIME1-204ENST00000476183 LENG8Q96PV6 779 aaPredicted RBP21.37■■□□□ 1.01
LIME1-204ENST00000476183 CDC6Q99741 560 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 SCNM1Q9BWG6 230 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 CALN1Q9BXU9 219 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 GPR27Q9NS67 375 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 LCMT1Q9UIC8 334 aa21.37■■□□□ 1.01
LIME1-204ENST00000476183 PRKCGP05129 697 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 ITGAVP06756 1048 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms