RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 FMR1Q06787 632 aaKnown RBP eCLIP3.89□□□□□ -1.79
LSM2-211ENST00000475835 SPIRE1Q08AE8 756 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 USP17L24Q0WX57 530 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 PAK1Q13153 545 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 PPIL2Q13356 520 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 IKZF1Q13422 519 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TOP3AQ13472 1001 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 ART3Q13508 389 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ATP1A4Q13733 1029 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 STARD3Q14849 445 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 C16orf72Q14CZ0 275 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 EMC2Q15006 297 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 POLD3Q15054 466 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 SEC23AQ15436 765 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 CCDC6Q16204 474 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SSX2Q16385 188 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 PPP1R3AQ16821 1122 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SPRED3Q2MJR0 410 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TMEM44Q2T9K0 475 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 IQCCQ4KMZ1 466 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TM4SF20Q53R12 229 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ESCO2Q56NI9 601 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZNF805Q5CZA5 627 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 EARS2Q5JPH6 523 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 EXOSC6Q5RKV6 272 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 HP1BP3Q5SSJ5 553 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 PDSS1Q5T2R2 415 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 IFIT1BQ5T764 474 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 GPR158Q5T848 1215 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 NT5DC1Q5TFE4 455 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 PXDC1Q5TGL8 231 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 STEAP3Q658P3 488 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 CLEC6AQ6EIG7 209 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 DPY19L2P1Q6NXN4 242 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SCYL2Q6P3W7 929 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 KLHDC10Q6PID8 442 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 MIGA2Q7L4E1 593 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 G2E3Q7L622 706 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 DCXRQ7Z4W1 244 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TMCO2Q7Z6W1 182 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 RNF180Q86T96 592 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 LINC00523Q86TU6 105 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 KBTBD6Q86V97 674 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 GPBP1Q86WP2 473 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 C2CD5Q86YS7 1000 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 CREG2Q8IUH2 290 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SRRM1Q8IYB3 904 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 CCDC105Q8IYK2 499 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 CYP4Z2PQ8N1L4 340 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 CPA6Q8N4T0 437 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SRBD1Q8N5C6 995 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 TRAM1L1Q8N609 369 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 CELF5Q8N6W0 485 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 USHBP1Q8N6Y0 703 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZNF366Q8N895 744 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 DTX3Q8N9I9 347 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 C12orf50Q8NA57 414 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 PDPRQ8NCN5 879 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SETD9Q8NE22 299 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 OR13C3Q8NGS6 347 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 RP9Q8TA86 221 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 C1orf216Q8TAB5 229 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 UBA3Q8TBC4 463 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ST7LQ8TDW4 575 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TRAPPC12Q8WVT3 735 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TRUB1Q8WWH5 349 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 PRPF31Q8WWY3 499 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 HTR3CQ8WXA8 447 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 PIGKQ92643 395 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 AKAP1Q92667 903 aaKnown RBP eCLIP3.89□□□□□ -1.79
LSM2-211ENST00000475835 PTP4A1Q93096 173 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TCEAL3Q969E4 200 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZNF566Q969W8 418 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SPACA9Q96E40 222 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 FAM89AQ96GI7 184 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 PIWIL1Q96J94 861 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 PLEKHA8Q96JA3 519 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ELMO2Q96JJ3 720 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZNF597Q96LX8 424 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 FAM161BQ96MY7 647 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZIM3Q96PE6 472 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 UCN2Q96RP3 112 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 KIFC1Q9BW19 673 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SF3B5Q9BWJ5 86 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 CHID1Q9BWS9 393 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TTLL2Q9BWV7 592 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 TMEM120AQ9BXJ8 343 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 MROQ9BYG7 248 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 FRMD8Q9BZ67 464 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZYG11BQ9C0D3 744 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SENP6Q9GZR1 1112 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 KLC2Q9H0B6 622 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 RACGAP1Q9H0H5 632 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ALX4Q9H161 411 aaPredicted RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 OR10A4Q9H209 315 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 EPC1Q9H2F5 836 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 NARFLQ9H6Q4 476 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 ZNF408Q9H9D4 720 aa3.89□□□□□ -1.79
LSM2-211ENST00000475835 SRA1Q9HD15 236 aaKnown RBP3.89□□□□□ -1.79
LSM2-211ENST00000475835 PRDM9Q9NQV7 894 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms