RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FNIP1Q8TF40 1166 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 VOPP1Q96AW1 172 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 HAUS4Q9H6D7 363 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 LRRC19Q9H756 370 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 NCKIPSDQ9NZQ3 722 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 GGT7Q9UJ14 662 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 ITM2BQ9Y287 266 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 CSNK1G3Q9Y6M4 447 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 ARHGAP42A6NI28 874 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 EEF2KO00418 725 aaKnown RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 SPINT1O43278 529 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 TM7SF2O76062 418 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 FTLP02792 175 aaPredicted RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 PRKCIP41743 596 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 ZNF135P52742 658 aaPredicted RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 PFN3P60673 137 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 INSM1Q01101 510 aaPredicted RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 ELP6Q0PNE2 266 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 ZNF542PQ5EBM4 170 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 PSTKQ8IV42 348 aaKnown RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 ZNF548Q8NEK5 533 aaPredicted RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 BTN2A2Q8WVV5 523 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 CENPTQ96BT3 561 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 TRIM11Q96F44 468 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 DHX35Q9H5Z1 703 aaKnown RBP20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 SCINQ9Y6U3 715 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 NBEAQ8NFP9 2946 aa20.6■□□□□ 0.89
PDLIM4-206ENST00000474421 A0A1B0GTH6 734 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 TMEM191CA6NGB0 347 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 DAPK3O43293 454 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 PRPSAP2O60256 369 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 PRAMEF11O60813 436 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 GP1BAP07359 652 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 GIMD1P0DJR0 217 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 MYBL1P10243 752 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 TIMP2P16035 220 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 JUNDP17535 347 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 THOP1P52888 689 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 CLDN6P56747 220 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 YPEL5P62699 121 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 KLHL30Q0D2K2 578 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 RTP5Q14D33 572 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 CYTH1Q15438 398 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 CFAP58Q5T655 872 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 CAVIN1Q6NZI2 390 aaKnown RBP20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 C19orf48Q6RUI8 117 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 ZNF571Q7Z3V5 609 aaPredicted RBP20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 DCBLD1Q8N8Z6 715 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 APOLD1Q96LR9 279 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 ZNF641Q96N77 438 aaPredicted RBP20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 MRPL47Q9HD33 250 aaKnown RBP20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 LHX3Q9UBR4 397 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 AK5Q9Y6K8 562 aa20.59■□□□□ 0.89
PDLIM4-206ENST00000474421 ITPR1Q14643 2758 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 A0A087WV48 116 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 K7ESM1 405 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 ATMINO43313 823 aaPredicted RBP20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 MMP20O60882 483 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 ZCCHC8Q6NZY4 707 aaKnown RBP20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 VPS36Q86VN1 386 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 EXOC2Q96KP1 924 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 TUBGCP5Q96RT8 1024 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 SNRNP25Q9BV90 132 aaKnown RBP20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 SUV39H2Q9H5I1 410 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 PDFQ9HBH1 243 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 GPATCH2LQ9NWQ4 482 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 CNOT8Q9UFF9 292 aaKnown RBP20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 PCSK1NQ9UHG2 260 aa20.58■□□□□ 0.89
PDLIM4-206ENST00000474421 TSPAN11A1L157 253 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 TPP1O14773 563 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 AQP9O43315 295 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 MT-CO3P00414 261 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 SERPINC1P01008 464 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 TPM4P67936 248 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 COL28A1Q2UY09 1125 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 TMEM52BQ4KMG9 183 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 FIGNQ5HY92 759 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 LRRC73Q5JTD7 316 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 ERAP2Q6P179 960 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 BRAT1Q6PJG6 821 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 RFX8Q6ZV50 586 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 NETO2Q8NC67 525 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 HNRNPLLQ8WVV9 542 aaKnown RBP20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 ZNF653Q96CK0 615 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 CELF6Q96J87 481 aaKnown RBP20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 TBATAQ96M53 351 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 SPASTQ9UBP0 616 aa20.57■□□□□ 0.88
PDLIM4-206ENST00000474421 J3KR12 359 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 INSIG1O15503 277 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 PALMO75781 387 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 NEBLO76041 1014 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 MIPP30301 263 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 IGFALSP35858 605 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 CSNK1DP48730 415 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 HCAR3P49019 387 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 PAPOLAP51003 745 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 EIF2B5Q13144 721 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 RFTN1Q14699 578 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 NR1I3Q14994 352 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 ACAP1Q15027 740 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms