RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 LIASO43766 372 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 NDUFB4O95168 129 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 LCATP04180 440 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 T-ENOLP0DO92 83 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 NAGAP17050 411 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 TTKP33981 857 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 RAD23BP54727 409 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 NR1H2P55055 460 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 EIF3BP55884 814 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 LPIN1Q14693 890 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 HLFQ16534 295 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 ZNF549Q6P9A3 640 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC22A25Q6T423 547 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 DLK2Q6UY11 383 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 TCP11L2Q8N4U5 519 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 IQCF1Q8N6M8 205 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 FAM216AQ8WUB2 273 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 ST8SIA4Q92187 359 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 ELP4Q96EB1 424 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 RNF125Q96EQ8 232 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 THOC3Q96J01 351 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 MARK4Q96L34 752 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 NAP1L4Q99733 375 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 H2AFJQ9BTM1 129 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 PDCL3Q9H2J4 239 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 RANBP17Q9H2T7 1088 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 MVB12BQ9H7P6 319 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 PLEKHB1Q9UF11 243 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 CRYL1Q9Y2S2 319 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC45A1Q9Y2W3 748 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 CYP46A1Q9Y6A2 500 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 IGKV2D-30A0A075B6S6 120 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 IGHV4-28A0A0C4DH34 117 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 PABPN1LA6NDY0 278 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 WNT9BO14905 357 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 LDB2O43679 373 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ITM2AO43736 263 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 GLUD1P00367 558 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 PYGLP06737 847 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 TFPIP10646 304 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 DDX5P17844 614 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ABCD1P33897 745 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 RYKP34925 604 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 KRT9P35527 623 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 AMTP48728 403 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 GLUD2P49448 558 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 TMPRSS3P57727 454 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 Q0VFX4 171 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 GALNT2Q10471 571 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 GPS2Q13227 327 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 VEPH1Q14D04 833 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 PRICKLE4Q2TBC4 344 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 TDRD12Q587J7 1177 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 JAKMIP3Q5VZ66 844 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 CPLX2Q6PUV4 134 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ZNF367Q7RTV3 350 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ZDHHC17Q8IUH5 632 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 PELI3Q8N2H9 469 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 PAF1Q8N7H5 531 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 OR14A16Q8NHC5 309 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 RASSF8Q8NHQ8 419 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ELP5Q8TE02 316 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 PHF21BQ96EK2 531 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 KIF1BPQ96EK5 621 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ZC3HAV1LQ96H79 300 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 URB1-AS1Q96HZ7 61 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 MEIS3Q99687 375 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 POLR3GLQ9BT43 218 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 SEZ6LQ9BYH1 1024 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 NPFFR1Q9GZQ6 430 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 LHPPQ9H008 270 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 VPS33BQ9H267 617 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 SMYD2Q9NRG4 433 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 TAS2R10Q9NYW0 307 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 NDRG3Q9UGV2 375 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 ARHGAP26Q9UNA1 814 aa3.43□□□□□ -1.86
ECHDC1-213ENST00000474240 TEX13CA0A0J9YWL9 993 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 KDM4EB2RXH2 506 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC25A17O43808 307 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GAGE7O76087 117 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 TMEM63AO94886 807 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 MT-CYBP00156 380 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 F9P00740 461 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 HEXAP06865 529 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 PRSS2P07478 247 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GALTP07902 379 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GAGE12FP0CL80 117 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GAGE12GP0CL81 117 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GAGE12IP0CL82 117 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 KRT10P13645 584 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 CCKARP32238 428 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 ELF1P32519 619 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 CDKN2AP42771 156 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 THBS3P49746 956 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 HDAC4P56524 1084 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 CRYZQ08257 329 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 PTP4A2Q12974 167 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GAGE1Q13065 139 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GAGE4Q13068 117 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms