RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 PDCP20941 246 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 AMPD3Q01432 767 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 NADK2Q4G0N4 442 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 PRR30Q53SZ7 412 aaPredicted RBP12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 DCAF12Q5T6F0 453 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 ANKS6Q68DC2 871 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 KCTD16Q68DU8 428 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 ENPP7Q6UWV6 458 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 CCDC112Q8NEF3 446 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 FAM46DQ8NEK8 389 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 TNRC6AQ8NDV7 1962 aaKnown RBP12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 SPG11Q96JI7 2443 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 LRP4O75096 1905 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 TOR1BO14657 336 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 SORBS2O94875 1100 aaKnown RBP12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 NR3C1P04150 777 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 FURINP09958 794 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 LIMK2P53671 638 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 SRP54P61011 504 aaKnown RBP12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 KRT83P78385 493 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 ABHD18Q0P651 414 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 EDRF1Q3B7T1 1238 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 NRSN1Q8IZ57 195 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 TP53I13Q8NBR0 393 aaPredicted RBP12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 RBM15Q96T37 977 aaKnown RBP eCLIP12.86□□□□□ -0.357e-6■■■■□ 22.8
PCYT1A-214ENST00000473978 BLZF1Q9H2G9 400 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
PCYT1A-214ENST00000473978 ABCA2Q9BZC7 2435 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 A0A1B0GTL3 188 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 B4DGG1 531 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 RFPL1O75677 317 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 VDRP11473 427 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 F8A1P23610 371 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 MPSTP25325 297 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 ALDH4A1P30038 563 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 PEX5P50542 639 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 CLCN6P51797 869 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 PITX1P78337 314 aaPredicted RBP12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 INPP5JQ15735 1006 aaPredicted RBP12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 KDELC2Q7Z4H8 507 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 FAM149B1Q96BN6 582 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 DHX58Q96C10 678 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 RTP4Q96DX8 246 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 C5orf34Q96MH7 638 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 HEPHQ9BQS7 1158 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 KCTD10Q9H3F6 313 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 ZSCAN16Q9H4T2 348 aaPredicted RBP12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 VANGL2Q9ULK5 521 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
PCYT1A-214ENST00000473978 C16orf96A6NNT2 1141 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 MMP20O60882 483 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 FBXO21O94952 628 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 IGLV3-25P01717 112 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 CD1CP29017 333 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 GGCXP38435 758 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 CCNHP51946 323 aaPredicted RBP12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 RAB15P59190 212 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 TRA2AQ13595 282 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 LCLAT1Q6UWP7 414 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 TAF8Q7Z7C8 310 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 TMEM135Q86UB9 458 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 FAM129CQ86XR2 697 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 TP53INP2Q8IXH6 220 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 BMPERQ8N8U9 685 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 RAB7BQ96AH8 199 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 PDXPQ96GD0 296 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 GBP4Q96PP9 640 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 CTRCQ99895 268 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 TMEM8AQ9HCN3 771 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 KLQ9UEF7 1012 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 SLC12A6Q9UHW9 1150 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 SLC5A6Q9Y289 635 aa12.84□□□□□ -0.35
PCYT1A-214ENST00000473978 SVILO95425 2214 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 A0A0D9SEW6 157 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 B4E171 279 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 CLDN11O75508 207 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 DNAJB5O75953 348 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 TM7SF2O76062 418 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 TRUB2O95900 331 aaKnown RBP12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 TNFP01375 233 aa12.83□□□□□ -0.36
PCYT1A-214ENST00000473978 THRAP10827 490 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms