RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GOLGA6L6A8MZA4 724 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 B4E171 279 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3LB9A6J9 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 C19orf81C9J6K1 198 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 STX16-NPEPL1H3BU86 382 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PEX12O00623 359 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 AP3D1O14617 1153 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 STX16O14662 325 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 DCLK1O15075 740 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CTAGE5O15320 804 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 KLK10O43240 276 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TAF5LO75529 589 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 FAM155BO75949 473 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PRSS23O95084 383 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CER1O95813 267 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBX18O95935 607 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CXCL10P02778 98 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 HNRNPA1P09651 372 aaKnown RBP eCLIP2.52□□□□□ -2.01
CALD1-216ENST00000473714 WEE2P0C1S8 567 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3HP0C7X1 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 KCNA2P16389 499 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 HOXB6P17509 224 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 RBL1P28749 1068 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TNFRSF8P28908 595 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 SLC5A2P31639 672 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 RDXP35241 583 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 KRT20P35900 424 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 BMPR1AP36894 532 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TSPAN7P41732 249 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 NPTX2P47972 431 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 KCNJ4P48050 445 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 RXRGP48443 463 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PCP4P48539 62 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 NRIP1P48552 1158 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 MCM2P49736 904 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PDE6CP51160 858 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ZNF134P52741 427 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PDE1AP54750 535 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 BACE1P56817 501 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 EIF4A1P60842 406 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 RPS7P62081 194 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 CHRNDQ07001 517 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.52□□□□□ -2.01
CALD1-216ENST00000473714 SF3A3Q12874 501 aaKnown RBP eCLIP2.52□□□□□ -2.01
CALD1-216ENST00000473714 SEMA3BQ13214 749 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TUBB3Q13509 450 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 BOP1Q14137 746 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 EFR3AQ14156 821 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 GPNMBQ14956 572 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 SF3A2Q15428 464 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBRG1Q3YBR2 411 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 SLC45A4Q5BKX6 768 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 RILPL1Q5EBL4 403 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 RBM20Q5T481 1227 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 DAB2IPQ5VWQ8 1189 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3GQ6DHY5 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3CQ6IPX1 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ACAD10Q6JQN1 1059 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ANKRD54Q6NXT1 300 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 DRICH1Q6PGQ1 229 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 ATF7IPQ6VMQ6 1270 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ZNF804AQ7Z570 1209 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PPP1R32Q7Z5V6 425 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D1Q86TI0 1168 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 RAB11FIP4Q86YS3 637 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ARMC8Q8IUR7 673 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CPOQ8IVL8 374 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3Q8IZP1 549 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 ABRAQ8N0Z2 381 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TDRD5Q8NAT2 981 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 B3GALNT2Q8NCR0 500 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 OR1N1Q8NGS0 311 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 UBE2Q2Q8WVN8 375 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ST8SIA4Q92187 359 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 SMG7Q92540 1137 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 CUL5Q93034 780 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 LENG9Q96B70 501 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 MIEF2Q96C03 454 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 RNF31Q96EP0 1072 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 RNF125Q96EQ8 232 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CDCA3Q99618 268 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 ZSWIM1Q9BR11 485 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 NUDT22Q9BRQ3 303 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 DDX23Q9BUQ8 820 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 GPR87Q9BY21 358 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TRIM5Q9C035 493 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 OSBPL5Q9H0X9 879 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 VPS16Q9H269 839 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ALDH8A1Q9H2A2 487 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 POMKQ9H5K3 350 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CXorf36Q9H7Y0 433 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 SYNPO2LQ9H987 977 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 GPR108Q9NPR9 543 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 EIF2B3Q9NR50 452 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 TMLHEQ9NVH6 421 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 HAUS2Q9NVX0 235 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ALKBH4Q9NXW9 302 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TRPM5Q9NZQ8 1165 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 DNMT3BQ9UBC3 853 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 STEAP1Q9UHE8 339 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms