RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SLCO6A1Q86UG4 719 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 PNPLA1Q8N8W4 532 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 OR13H1Q8NG92 308 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 ASB12Q8WXK4 309 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 CINPQ9BW66 212 aaPredicted RBP22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 C1QTNF2Q9BXJ5 285 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 CALN1Q9BXU9 219 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 TOR4AQ9NXH8 423 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 FTSJ1Q9UET6 329 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 IPO11Q9UI26 975 aaKnown RBP22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 KLK13Q9UKR3 277 aa22.81■■□□□ 1.24
PTP4A1-203ENST00000473334 ANKRD36A6QL64 1941 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 IGLON5A6NGN9 336 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 ATXN1LP0C7T5 689 aaKnown RBP22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 SSR1P43307 286 aaKnown RBP22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 CSNK1DP48730 415 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 SUOXP51687 545 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 BNIP3Q12983 259 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 LRRC73Q5JTD7 316 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 KYAT3Q6YP21 454 aaKnown RBP22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 TP53INP2Q8IXH6 220 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 TSEN2Q8NCE0 465 aaKnown RBP22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 HCAR2Q8TDS4 363 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 LENG8Q96PV6 779 aaPredicted RBP22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 TUBGCP5Q96RT8 1024 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 PACSIN1Q9BY11 444 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 SUV39H2Q9H5I1 410 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 ETNK2Q9NVF9 386 aa22.8■■□□□ 1.24
PTP4A1-203ENST00000473334 TSPAN11A1L157 253 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 RAD51BO15315 384 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 AKR1B10O60218 316 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 TIMP2P16035 220 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 XPAP23025 273 aaPredicted RBP22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 RGRP47804 291 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 CDH6P55285 790 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 KRT81Q14533 505 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 PTAR1Q7Z6K3 402 aaPredicted RBP22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 SRLQ86TD4 932 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 DENND6BQ8NEG7 585 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 TSC1Q92574 1164 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 BMFQ96LC9 184 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 ZNF641Q96N77 438 aaPredicted RBP22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 ZNF599Q96NL3 588 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 KLF6Q99612 283 aaPredicted RBP22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 KLHL11Q9NVR0 708 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 RCOR3Q9P2K3 495 aaPredicted RBP22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 LCMT1Q9UIC8 334 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 MSRB2Q9Y3D2 182 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 FRYQ5TBA9 3013 aa22.79■■□□□ 1.24
PTP4A1-203ENST00000473334 SPEGQ15772 3267 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 GOLGA8CPA6NN73 597 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 PROSCO94903 275 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 DKK1O94907 266 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 TMEM253P0C7T8 217 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 SERPINB6P35237 376 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 ADKP55263 362 aaKnown RBP22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 ELP6Q0PNE2 266 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 CFAP58Q5T655 872 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 TMCO4Q5TGY1 634 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 UNQ6494/PRO21346Q6UXR6 183 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 Q6ZSR6 202 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 KANSL1Q7Z3B3 1105 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 DCP2Q8IU60 420 aaKnown RBP22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 SLC22A18ASQ8N1D0 253 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 EID2Q8N6I1 236 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 FAM71BQ8TC56 605 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 CXorf40AQ8TE69 158 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 CHP1Q99653 195 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 ATP13A3Q9H7F0 1226 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 GPR27Q9NS67 375 aa22.78■■□□□ 1.24
PTP4A1-203ENST00000473334 FAM221BA6H8Z2 402 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 POM121BA6NF01 834 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 FPGTO14772 594 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 SERPINA4P29622 427 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 RABIFP47224 123 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 RENBPP51606 427 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 NSUN2Q08J23 767 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 LBRQ14739 615 aaKnown RBP22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 BRAT1Q6PJG6 821 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 SARM1Q6SZW1 724 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 CNGA4Q8IV77 575 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 CNDP2Q96KP4 475 aaKnown RBP22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 CCDC42Q96M95 316 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 SEPT3Q9UH03 358 aa22.77■■□□□ 1.24
PTP4A1-203ENST00000473334 MAP1BP46821 2468 aaKnown RBP22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 C1QTNF9BB2RNN3 333 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 ENC1O14682 589 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 BUB1BO60566 1050 aaPredicted RBP22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 MMP20O60882 483 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 SDC3O75056 442 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 TM7SF2O76062 418 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 LDOC1O95751 146 aaPredicted RBP22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 C1QTNF9P0C862 333 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 ITIH2P19823 946 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 GJC1P36383 396 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 ARSEP51690 589 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 UGP2Q16851 508 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 TMEM52BQ4KMG9 183 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 CPNE8Q86YQ8 564 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 CAMK1DQ8IU85 385 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms