RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RHOAP61586 193 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 DAB2P98082 770 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 PDE1CQ14123 709 aaPredicted RBP15.48■□□□□ 0.07
VTI1A-203ENST00000472892 RTP5Q14D33 572 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 COL28A1Q2UY09 1125 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 TPRG1LQ5T0D9 272 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 ERMARDQ5T6L9 678 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 DCBLD1Q8N8Z6 715 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 HNRNPLLQ8WVV9 542 aaKnown RBP15.48■□□□□ 0.07
VTI1A-203ENST00000472892 NXPE2Q96DL1 559 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 APOLD1Q96LR9 279 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 EIF3CQ99613 913 aaKnown RBP15.48■□□□□ 0.07
VTI1A-203ENST00000472892 DUSP23Q9BVJ7 150 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 PDFQ9HBH1 243 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 USP29Q9HBJ7 922 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 LHX3Q9UBR4 397 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 IPO11Q9UI26 975 aaKnown RBP15.48■□□□□ 0.07
VTI1A-203ENST00000472892 CLCA2Q9UQC9 943 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 CSNK1G3Q9Y6M4 447 aa15.48■□□□□ 0.07
VTI1A-203ENST00000472892 ITPR1Q14643 2758 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 ADAMTS20P59510 1910 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 LY6G6EA0A0G2JKS1 128 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 A0A1B0GTH6 734 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 INSIG1O15503 277 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 MMP20O60882 483 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 TM7SF2O76062 418 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 FTLP02792 175 aaPredicted RBP15.47■□□□□ 0.07
VTI1A-203ENST00000472892 PYGBP11216 843 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 ITIH2P19823 946 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 TPI1P60174 286 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 EIF2B5Q13144 721 aaKnown RBP15.47■□□□□ 0.07
VTI1A-203ENST00000472892 ASIC2Q16515 512 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 CA9Q16790 459 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 TMEM52BQ4KMG9 183 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 ZNF571Q7Z3V5 609 aaPredicted RBP15.47■□□□□ 0.07
VTI1A-203ENST00000472892 ZNF548Q8NEK5 533 aaPredicted RBP15.47■□□□□ 0.07
VTI1A-203ENST00000472892 FNIP1Q8TF40 1166 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 NAP1L5Q96NT1 182 aaPredicted RBP15.47■□□□□ 0.07
VTI1A-203ENST00000472892 EDEM3Q9BZQ6 932 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 SLC39A8Q9C0K1 460 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 GPATCH2LQ9NWQ4 482 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
VTI1A-203ENST00000472892 AP4E1Q9UPM8 1137 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 U3KQA8 63 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 NBEAQ8NFP9 2946 aa15.47■□□□□ 0.07
VTI1A-203ENST00000472892 URB1O60287 2271 aaKnown RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 TSPAN11A1L157 253 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 H3BM21 787 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 J3KR12 359 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 TOR1BO14657 336 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 PRAMEF11O60813 436 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 NEBLO76041 1014 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 MT-CO3P00414 261 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 GP1BAP07359 652 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 JUNDP17535 347 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 ZNF165P49910 485 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 DUSP3P51452 185 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 YPEL5P62699 121 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 PTK2BQ14289 1009 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 GRM3Q14832 879 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 NR1I3Q14994 352 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 LRRC73Q5JTD7 316 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 CDCP2Q5VXM1 449 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 AFMIDQ63HM1 303 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 E4F1Q66K89 784 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 KDM7AQ6ZMT4 941 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 DNAAF5Q86Y56 855 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 CXorf40AQ8TE69 158 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 CELF6Q96J87 481 aaKnown RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 ZNF641Q96N77 438 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 PEBP4Q96S96 227 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 SUV39H2Q9H5I1 410 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 DHX35Q9H5Z1 703 aaKnown RBP15.46■□□□□ 0.07
VTI1A-203ENST00000472892 PCSK1NQ9UHG2 260 aa15.46■□□□□ 0.07
VTI1A-203ENST00000472892 EEF2KO00418 725 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 DDX3XO00571 662 aaKnown RBP eCLIP15.45■□□□□ 0.062e-9■■□□□ 14.2
VTI1A-203ENST00000472892 TPP1O14773 563 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 AQP9O43315 295 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 OPA1O60313 960 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 BUB1BO60566 1050 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 RNF8O76064 485 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 MYF5P13349 255 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 MIPP30301 263 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 IGFALSP35858 605 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 CSNK1DP48730 415 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 HCAR3P49019 387 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 PAPOLAP51003 745 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 ELP6Q0PNE2 266 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 IQCB1Q15051 598 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 UGP2Q16851 508 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 ZCCHC8Q6NZY4 707 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 RFX8Q6ZV50 586 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 CYP4V2Q6ZWL3 525 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 VPS36Q86VN1 386 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 PSTKQ8IV42 348 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 TP53I13Q8NBR0 393 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 BTN2A2Q8WVV5 523 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms