RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ERCC2P18074 760 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 AMPD1P23109 780 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 MARCKSL1P49006 195 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 ARSEP51690 589 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 ZNF135P52742 658 aaPredicted RBP9.31□□□□□ -0.92
SMC4-213ENST00000472282 PLK1P53350 603 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 OXCT1P55809 520 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 GNA12Q03113 381 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 DPYSQ14117 519 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 DPYSL3Q14195 570 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 E2F5Q15329 346 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 IFI16Q16666 785 aaKnown RBP9.31□□□□□ -0.92
SMC4-213ENST00000472282 ZNF776Q68DI1 518 aaPredicted RBP9.31□□□□□ -0.92
SMC4-213ENST00000472282 POLNQ7Z5Q5 900 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 MMAAQ8IVH4 418 aaKnown RBP9.31□□□□□ -0.92
SMC4-213ENST00000472282 RHOT1Q8IXI2 618 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 LRRC57Q8N9N7 239 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 ALG14Q96F25 216 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 CALR3Q96L12 384 aaKnown RBP9.31□□□□□ -0.92
SMC4-213ENST00000472282 CSPG4P5Q96PW8 444 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 PPP1R9BQ96SB3 815 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 FAM129BQ96TA1 746 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 PSMB7Q99436 277 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 FEM1AQ9BSK4 669 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 BTBD1Q9H0C5 482 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 PABPC3Q9H361 631 aaKnown RBP9.31□□□□□ -0.92
SMC4-213ENST00000472282 SLC32A1Q9H598 525 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 GAREM1Q9H706 876 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 TM9SF3Q9HD45 589 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 SUN2Q9UH99 717 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 VPS28Q9UK41 221 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 MFHAS1Q9Y4C4 1052 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 OR51B4Q9Y5P0 310 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 CAPN6Q9Y6Q1 641 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 ACACBO00763 2458 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 FAM47DPA6NHR8 397 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 C10orf142B7Z368 130 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 PLK4O00444 970 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 WNT9AO14904 365 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 SNAP91O60641 907 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 RAMP2O60895 175 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 PALMO75781 387 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 SRPRAP08240 638 aaKnown RBP9.3□□□□□ -0.92
SMC4-213ENST00000472282 GLDCP23378 1020 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ACVRL1P37023 503 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 PSMD8P48556 350 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 HCAR3P49019 387 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ST8SIA6P61647 398 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ECT2LQ008S8 904 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 PDK2Q15119 407 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 CST6Q15828 149 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 KIF19Q2TAC6 998 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 HLA-BQ31612 363 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 LRRC38Q5VT99 294 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 UNQ6494/PRO21346Q6UXR6 183 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ZNF783Q6ZMS7 281 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 NAXDQ8IW45 347 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 CHCHD4Q8N4Q1 142 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 AADATQ8N5Z0 425 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 NPWQ8N729 165 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 PNPLA1Q8N8W4 532 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 DCAF4L2Q8NA75 395 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 NETO2Q8NC67 525 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 KCTD6Q8NC69 237 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 FAM71BQ8TC56 605 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 KIAA1524Q8TCG1 905 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 RAPGEF5Q92565 580 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 KRT35Q92764 455 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 GATA6Q92908 595 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
SMC4-213ENST00000472282 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 SPON2Q9BUD6 331 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 CALN1Q9BXU9 219 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 PCED1AQ9H1Q7 454 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 RETREG1Q9H6L5 497 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 NOL6Q9H6R4 1146 aaKnown RBP9.3□□□□□ -0.92
SMC4-213ENST00000472282 FBRSQ9HAH7 460 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ATP13A1Q9HD20 1204 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 LZTFL1Q9NQ48 299 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 ETNK2Q9NVF9 386 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 FBXL12Q9NXK8 326 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 SLC25A13Q9UJS0 675 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 BTBD3Q9Y2F9 522 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 SNX11Q9Y5W9 270 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 KNL1Q8NG31 2342 aa9.3□□□□□ -0.92
SMC4-213ENST00000472282 CABIN1Q9Y6J0 2220 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 COL5A1P20908 1838 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 EDDM13A0A1B0GTR0 161 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 RASA4BC9J798 803 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 RNF103O00237 685 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 CBX4O00257 560 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 RASA4O43374 803 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 MFSD11O43934 449 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 FTCDO95954 541 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 WNT1P04628 370 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 PROS1P07225 676 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 KDELR1P24390 212 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms