RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CD207Q9UJ71 328 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 CNPY2Q9Y2B0 182 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 PCDHAC2Q9Y5I4 1007 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 J3KR12 359 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 SLC25A17O43808 307 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 ADAP00813 363 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 DGKAP23743 735 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 LIFRP42702 1097 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 ARL16Q0P5N6 197 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 TROAPQ12815 778 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 TIGD6Q17RP2 521 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 SETMARQ53H47 684 aaPredicted RBP4.8□□□□□ -1.64
CD46-213ENST00000471987 SH2D4BQ5SQS7 431 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 STPG1Q5TH74 334 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 FAM69BQ5VUD6 431 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 C1orf228Q6PIY5 440 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 SFTPA2Q8IWL1 248 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 DNAAF1Q8NEP3 725 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 LINS1Q8NG48 757 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 NEK9Q8TD19 979 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 SECTM1Q8WVN6 248 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 RUBCNQ92622 972 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 CD101Q93033 1021 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 OTULINQ96BN8 352 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 UBTD1Q9HAC8 227 aa4.8□□□□□ -1.64
CD46-213ENST00000471987 TLR8Q9NR97 1041 aaKnown RBP4.8□□□□□ -1.64
CD46-213ENST00000471987 F5H423 210 aaPredicted RBP4.79□□□□□ -1.64
CD46-213ENST00000471987 IPO5O00410 1097 aaKnown RBP4.79□□□□□ -1.64
CD46-213ENST00000471987 TFPIP10646 304 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 SSTR2P30874 369 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 TTKP33981 857 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 AARSP49588 968 aaKnown RBP eCLIP4.79□□□□□ -1.64
CD46-213ENST00000471987 CBWD5Q5RIA9 395 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 TMEM170AQ8WVE7 144 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 THAP4Q8WY91 577 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 RNFT2Q96EX2 444 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 FEM1CQ96JP0 617 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 TWSG1Q9GZX9 223 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 TTC12Q9H892 705 aaPredicted RBP4.79□□□□□ -1.64
CD46-213ENST00000471987 CHODLQ9H9P2 273 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 PLCB1Q9NQ66 1216 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 SMARCAL1Q9NZC9 954 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 GRHPRQ9UBQ7 328 aa4.79□□□□□ -1.64
CD46-213ENST00000471987 IGHV4OR15-8A0A075B7B6 117 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.78□□□□□ -1.64
CD46-213ENST00000471987 hDV102S1A0JD36 115 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 CPED1A4D0V7 1026 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 PMS2P2O95744 297 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 ANOS1P23352 680 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 HNF1BP35680 557 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 CHAF1AQ13111 956 aaPredicted RBP4.78□□□□□ -1.64
CD46-213ENST00000471987 CUL4BQ13620 913 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
CD46-213ENST00000471987 SYCP2LQ5T4T6 812 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 DENND1BQ6P3S1 775 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 MAB21L3Q8N8X9 362 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 POF1BQ8WVV4 589 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 HSPH1Q92598 858 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 WBP2Q969T9 261 aa4.78□□□□□ -1.64
CD46-213ENST00000471987 HNRNPCL2B2RXH8 293 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 EBAG9O00559 213 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 FAM155BO75949 473 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 FBXO43Q4G163 708 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 FAM83BQ5T0W9 1011 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 PMS2CLQ68D20 193 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 NAPEPLDQ6IQ20 393 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 JMJD6Q6NYC1 403 aaPredicted RBP4.77□□□□□ -1.65
CD46-213ENST00000471987 ZNF449Q6P9G9 518 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 GDPD4Q6W3E5 623 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 SHFQ7M4L6 423 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 CHD1LQ86WJ1 897 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 ARRDC2Q8TBH0 407 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 EBF2Q9HAK2 575 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 DERAQ9Y315 318 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 SNX9Q9Y5X1 595 aa4.77□□□□□ -1.65
CD46-213ENST00000471987 WNT9BO14905 357 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 XPNPEP2O43895 674 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 CD72P21854 359 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 ADD2P35612 726 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 NLRP5P59047 1200 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 SLC18A3Q16572 532 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 CTXN3Q4LDR2 81 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 IL20RBQ6UXL0 311 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 SH3KBP1Q96B97 665 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 MMP28Q9H239 520 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 NDRG3Q9UGV2 375 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 SLCO3A1Q9UIG8 710 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 SUFUQ9UMX1 484 aa4.76□□□□□ -1.65
CD46-213ENST00000471987 KIF26BQ2KJY2 2108 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 STX16-NPEPL1H3BU86 382 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 STX16O14662 325 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 HSPA12AO43301 675 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 DHX16O60231 1041 aaKnown RBP4.75□□□□□ -1.65
CD46-213ENST00000471987 TIPRLO75663 272 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 KDM4BO94953 1096 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 CLDN14O95500 239 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 TK1P04183 234 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 CHRM4P08173 479 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms