RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GKP32189 559 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 PTGER3P43115 390 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 RGRP47804 291 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 CREB5Q02930 508 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 ADCY2Q08462 1091 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 PRKD1Q15139 912 aaPredicted RBP15.28■□□□□ 0.04
SNX13-205ENST00000471744 NOMO1Q15155 1222 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 DCAF12L1Q5VU92 463 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 NCEH1Q6PIU2 408 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 PARS2Q7L3T8 475 aaKnown RBP15.28■□□□□ 0.04
SNX13-205ENST00000471744 ASCL5Q7RTU5 278 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 SYT12Q8IV01 421 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 SLC41A1Q8IVJ1 513 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 DNASE2BQ8WZ79 361 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 HAUS1Q96CS2 278 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 VAT1Q99536 393 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 IL12RB2Q99665 862 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 C6orf106Q9H6K1 298 aaPredicted RBP15.28■□□□□ 0.04
SNX13-205ENST00000471744 KNL1Q8NG31 2342 aa15.28■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3DA0A087WVF3 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3IA0A087WXS9 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3EA0A087X179 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3KA0A087X1G2 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3FA6NER0 549 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 FAM47DPA6NHR8 397 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3LB9A6J9 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 PLK4O00444 970 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TSPAN6O43657 245 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 KIF5CO60282 957 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 PIGNO95427 931 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 JCHAINP01591 159 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3HP0C7X1 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 GNSP15586 552 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 XPAP23025 273 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 MPLP40238 635 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 POLR2LP62875 67 aaKnown RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 ITKQ08881 620 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 SLC45A4Q5BKX6 768 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 PEAR1Q5VY43 1037 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3GQ6DHY5 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3CQ6IPX1 549 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 ARMCX6Q7L4S7 300 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TRIM69Q86WT6 500 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 RGL4Q8IZJ4 473 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 TBC1D3Q8IZP1 549 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 PGBD5Q8N414 524 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 PAF1Q8N7H5 531 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 CEP76Q8TAP6 659 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 ACTL9Q8TC94 416 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 VOPP1Q96AW1 172 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.046e-7■■■■□ 21.8
SNX13-205ENST00000471744 VPS45Q9NRW7 570 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.04
SNX13-205ENST00000471744 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
SNX13-205ENST00000471744 PRR5-ARHGAP8B1AHC4 643 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 C10orf142B7Z368 130 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 H7C0C1 242 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 KCNK1O00180 336 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 FSBPO95073 299 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 HLA-DQB2P05538 268 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 SERPINF2P08697 491 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 ITPKAP23677 461 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 ATP5OP48047 213 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 MAXP61244 160 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
SNX13-205ENST00000471744 ELP6Q0PNE2 266 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 TEX44Q53QW1 395 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 KIAA1161Q6NSJ0 714 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 TTC7BQ86TV6 843 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 PRPF39Q86UA1 669 aaKnown RBP15.26■□□□□ 0.03
SNX13-205ENST00000471744 ZC3H18Q86VM9 953 aaKnown RBP15.26■□□□□ 0.03
SNX13-205ENST00000471744 CAMK1DQ8IU85 385 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 CDKL3Q8IVW4 592 aaPredicted RBP15.26■□□□□ 0.03
SNX13-205ENST00000471744 DEFB119Q8N690 84 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 SNX19Q92543 992 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 PIGKQ92643 395 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 ECHDC3Q96DC8 303 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 FEM1CQ96JP0 617 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 SEMA3CQ99985 751 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 TLR10Q9BXR5 811 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
SNX13-205ENST00000471744 ARRDC1-AS1Q9H2J1 176 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 NOD2Q9HC29 1040 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
SNX13-205ENST00000471744 SEPT10Q9P0V9 454 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 PILRBQ9UKJ0 227 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 TTLL3Q9Y4R7 772 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 FADS3Q9Y5Q0 445 aa15.26■□□□□ 0.03
SNX13-205ENST00000471744 UPK3BL1B0FP48 263 aa15.25■□□□□ 0.03
SNX13-205ENST00000471744 UPK3BL2E5RIL1 263 aa15.25■□□□□ 0.03
SNX13-205ENST00000471744 RNF103O00237 685 aa15.25■□□□□ 0.03
SNX13-205ENST00000471744 NEMP1O14524 444 aa15.25■□□□□ 0.03
SNX13-205ENST00000471744 TRAFD1O14545 582 aaPredicted RBP15.25■□□□□ 0.03
SNX13-205ENST00000471744 KCNK3O14649 394 aa15.25■□□□□ 0.03
SNX13-205ENST00000471744 HTRA2O43464 458 aaPredicted RBP15.25■□□□□ 0.03
SNX13-205ENST00000471744 LATO43561 262 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms