RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SERPINA4P29622 427 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 PTPN7P35236 360 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 SCNN1BP51168 640 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 DYNLT1P63172 113 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 ARHGAP8P85298 464 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 GSE1Q14687 1217 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 TRIM61Q5EBN2 209 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 KAZNQ674X7 775 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 BRAT1Q6PJG6 821 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 BBS12Q6ZW61 710 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 PRPF39Q86UA1 669 aaKnown RBP15.46■□□□□ 0.07
SDC3-203ENST00000471567 KIAA2013Q8IYS2 634 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 PGBD5Q8N414 524 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 SNX19Q92543 992 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 OLFM3Q96PB7 478 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 ORAI3Q9BRQ5 295 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 NUSAP1Q9BXS6 441 aaKnown RBP15.46■□□□□ 0.07
SDC3-203ENST00000471567 MIR1-1HGQ9H1L0 117 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 SMOC1Q9H4F8 434 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 FADS3Q9Y5Q0 445 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 CAPN6Q9Y6Q1 641 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 ZNF292O60281 2723 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 A0A1W2PQ67 120 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 PATE3B3GLJ2 98 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 BCAT2O15382 392 aaPredicted RBP15.45■□□□□ 0.06
SDC3-203ENST00000471567 TSPAN6O43657 245 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 RNGTTO60942 597 aaKnown RBP15.45■□□□□ 0.06
SDC3-203ENST00000471567 PIGNO95427 931 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 IRX4P78413 519 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 BCL2L1Q07817 233 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
SDC3-203ENST00000471567 NPNTQ6UXI9 565 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 TTC7BQ86TV6 843 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 HORMAD1Q86X24 394 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 CAMK1DQ8IU85 385 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 ALG3Q92685 438 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 P3H4Q92791 437 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 HES6Q96HZ4 224 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 FEM1CQ96JP0 617 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 LGMNQ99538 433 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 CAPN10Q9HC96 672 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 NT5MQ9NPB1 228 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 SCUBE2Q9NQ36 999 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 RBM22Q9NW64 420 aaKnown RBP eCLIP15.45■□□□□ 0.06
SDC3-203ENST00000471567 DMTF1Q9Y222 760 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 PPP2R2CQ9Y2T4 447 aa15.45■□□□□ 0.06
SDC3-203ENST00000471567 USP34Q70CQ2 3546 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 AREL1O15033 823 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 DDX3YO15523 660 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 SOCS5O75159 536 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 NEBLO76041 1014 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 PCDH8O95206 1070 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 FTCDO95954 541 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 CFIP05156 583 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 TIMP2P16035 220 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 ABL2P42684 1182 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 PPP2CBP62714 309 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 POLR2LP62875 67 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 RACK1P63244 317 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 PPP2CAP67775 309 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 IFI35P80217 286 aaPredicted RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 ADCY2Q08462 1091 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 AASDHQ4L235 1098 aaPredicted RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 CFAP58Q5T655 872 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 ALG1LQ6GMV1 187 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 KIAA1161Q6NSJ0 714 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 ZCCHC9Q8N567 271 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 SPOCK2Q92563 424 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 IL12RB2Q99665 862 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 OSBPL8Q9BZF1 889 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 POLR1EQ9GZS1 481 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 EBF2Q9HAK2 575 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 LZTFL1Q9NQ48 299 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.44■□□□□ 0.06
SDC3-203ENST00000471567 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
SDC3-203ENST00000471567 PI4KAP42356 2102 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 A0A1W2PQU0 124 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 UPK3BL1B0FP48 263 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 UPK3BL2E5RIL1 263 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 APOC4-APOC2K7ER74 178 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 TRAFD1O14545 582 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 HTRA2O43464 458 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 APOC2P02655 101 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 SYPP08247 313 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 PYGMP11217 842 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 PECAM1P16284 738 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 XPAP23025 273 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 GRIA4P48058 902 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 AFF3P51826 1226 aaKnown RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 MAXP61244 160 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 RPS21P63220 83 aaKnown RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 AP1B1Q10567 949 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 XRCC4Q13426 336 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 LLGL1Q15334 1064 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 TEAD4Q15561 434 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 UGP2Q16851 508 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 ZNF284Q2VY69 593 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms