RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TLN1Q9Y490 2541 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 A8MU76 341 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 THAP12O43422 761 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 ACTN4O43707 911 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 RAD1O60671 282 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 TNFP01375 233 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 ITIH2P19823 946 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CD82P27701 267 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CSTF2P33240 577 aaKnown RBP eCLIP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 UGT1A3P35503 534 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 COPB1P53618 953 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 OR1D5P58170 312 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 SRP54P61011 504 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 C1QBPQ07021 282 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CDC20Q12834 499 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 IRF4Q15306 451 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 ALG11Q2TAA5 492 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 LRRK1Q38SD2 2015 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 C8orf34Q49A92 452 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 RESP18Q5W5W9 173 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 RETSATQ6NUM9 610 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 LRRC31Q6UY01 552 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 SPRED1Q7Z699 444 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 DTX1Q86Y01 620 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 PASD1Q8IV76 773 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 DCAF4L2Q8NA75 395 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 OR6C4Q8NGE1 309 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 APOBEC4Q8WW27 367 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 MIB2Q96AX9 1013 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 FAXDC2Q96IV6 333 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CCDC74BQ96LY2 380 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 KLHL32Q96NJ5 620 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CATSPER2Q96P56 530 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 LENG8Q96PV6 779 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 TAAR9Q96RI9 348 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 TSG101Q99816 390 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CTRCQ99895 268 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 NUDT22Q9BRQ3 303 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 INTS2Q9H0H0 1204 aaKnown RBP6.97□□□□□ -1.29
HDAC1-204ENST00000471488 TKTL2Q9H0I9 626 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 SYNCQ9H7C4 482 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 TUBD1Q9UJT1 453 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 OR51B4Q9Y5P0 310 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 B3GALT1Q9Y5Z6 326 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CREBBPQ92793 2442 aa6.97□□□□□ -1.29
HDAC1-204ENST00000471488 CLEC18AA5D8T8 446 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 MED7O43513 233 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 AP1G1O43747 822 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 KRT38O76015 456 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 FGF3P11487 239 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 PFKFB1P16118 471 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 GLB1P16278 677 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 SERPINH1P50454 418 aaKnown RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 VASPP50552 380 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 CLCN6P51797 869 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 MAZP56270 477 aaKnown RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 YPEL5P62699 121 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 ZFP36L1Q07352 338 aaKnown RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 INPP5AQ14642 412 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 LRRC14Q15048 493 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 POLD3Q15054 466 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 CCDC40Q4G0X9 1142 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 C14orf28Q4W4Y0 310 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF805Q5CZA5 627 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 CFAP58Q5T655 872 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 NKAIN2Q5VXU1 208 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 CLEC18BQ6UXF7 455 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 ASB18Q6ZVZ8 466 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 PHLDB2Q86SQ0 1253 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 FAM114A1Q8IWE2 563 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 PCDH20Q8N6Y1 951 aaKnown RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 NETO2Q8NC67 525 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 CLEC18CQ8NCF0 446 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 DENND6BQ8NEG7 585 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 ATL2Q8NHH9 583 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 GPBAR1Q8TDU6 330 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 CENPTQ96BT3 561 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 ARHGEF26Q96DR7 871 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 PDXPQ96GD0 296 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 HAPLN3Q96S86 360 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 NCAPGQ9BPX3 1015 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 THAP9Q9H5L6 903 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 WDCPQ9H6R7 721 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 MRPL40Q9NQ50 206 aaKnown RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 TBC1D30Q9Y2I9 924 aa6.96□□□□□ -1.3
HDAC1-204ENST00000471488 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-204ENST00000471488 NBASA2RRP1 2371 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 USP9YO00507 2555 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 MKRN2OSH3BPM6 223 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 TEX33O43247 280 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 SEMA7AO75326 666 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 KATNA1O75449 491 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 CPNE6O95741 557 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 PRKCGP05129 697 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 HSP90AA1P07900 732 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 TCN2P20062 427 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 OAS2P29728 719 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 GPD2P43304 727 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms