RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TMEM145Q8NBT3 493 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 SLC35G2Q8TBE7 412 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 TSC1Q92574 1164 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 CALN1Q9BXU9 219 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 RBSNQ9H1K0 784 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 SUV39H2Q9H5I1 410 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 ERVMER34-1Q9H9K5 563 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 KLHL11Q9NVR0 708 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 DKK3Q9UBP4 350 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 YKT6O15498 198 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 BUB1BO60566 1050 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-218ENST00000470942 CBFA2T3O75081 653 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 TOP3BO95985 862 aaKnown RBP15.87■□□□□ 0.13
HDAC6-218ENST00000470942 KRT7P08729 469 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 CD48P09326 243 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 ITIH2P19823 946 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 IL4RP24394 825 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 RGRP47804 291 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 CSNK1DP48730 415 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 RENBPP51606 427 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 TAS2R40P59535 323 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 FGL2Q14314 439 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 LBRQ14739 615 aaKnown RBP15.87■□□□□ 0.13
HDAC6-218ENST00000470942 SHBQ15464 509 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 TMCO4Q5TGY1 634 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 ZSCAN30Q86W11 494 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 CAMK1DQ8IU85 385 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 MAP7D3Q8IWC1 876 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 ATPAF2Q8N5M1 289 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 CXorf40AQ8TE69 158 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 ZNF599Q96NL3 588 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 CDC6Q99741 560 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 ATP13A3Q9H7F0 1226 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 RCOR3Q9P2K3 495 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-218ENST00000470942 SEPT3Q9UH03 358 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 HS3ST3A1Q9Y663 406 aa15.87■□□□□ 0.13
HDAC6-218ENST00000470942 LRRK1Q38SD2 2015 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 GOLGA8CPA6NN73 597 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 AREL1O15033 823 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 SPINT1O43278 529 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 MMP20O60882 483 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 FTH1P19P0C7X4 201 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 SPINK2P20155 84 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 SERPINA4P29622 427 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 MAN1A1P33908 653 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 SCNN1BP51168 640 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 NSUN2Q08J23 767 aaKnown RBP eCLIP15.86■□□□□ 0.13
HDAC6-218ENST00000470942 SLC10A7Q0GE19 358 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 BNIP3Q12983 259 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 DPYSL3Q14195 570 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 ZNF235Q14590 738 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 PDK2Q15119 407 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 GCNT7Q6ZNI0 430 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 PTAR1Q7Z6K3 402 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-218ENST00000470942 RHOT2Q8IXI1 618 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 BBS5Q8N3I7 341 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 TC2NQ8N9U0 490 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 OR13H1Q8NG92 308 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 FAM71BQ8TC56 605 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 HCAR2Q8TDS4 363 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 NSMCE1Q8WV22 266 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 ZNF641Q96N77 438 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-218ENST00000470942 CNTNAP3BQ96NU0 1288 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 TUBGCP5Q96RT8 1024 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 C1QTNF2Q9BXJ5 285 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 CNTNAP3Q9BZ76 1288 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 APOBEC2Q9Y235 224 aaKnown RBP15.86■□□□□ 0.13
HDAC6-218ENST00000470942 CEP295Q9C0D2 2601 aa15.86■□□□□ 0.13
HDAC6-218ENST00000470942 CHD8Q9HCK8 2581 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 A6NNZ2 444 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 FPGTO14772 594 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 RAD51BO15315 384 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 TRIM16O95361 564 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 EPHA8P29322 1005 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ARHGAP25P42331 645 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 RXRGP48443 463 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 SUOXP51687 545 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ARSEP51690 589 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ZNF75DP51815 510 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 SHC2P98077 582 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 BCL2L1Q07817 233 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ELP6Q0PNE2 266 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ANKRD20A8PQ5CZ79 823 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ERAP2Q6P179 960 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 Q6ZSR6 202 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 ABI3BPQ7Z7G0 1075 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 PNPLA1Q8N8W4 532 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 PCDH19Q8TAB3 1148 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 BAHD1Q8TBE0 780 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-218ENST00000470942 FAM174AQ8TBP5 190 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 SAP25Q8TEE9 199 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 BMFQ96LC9 184 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 PSKH2Q96QS6 385 aa15.85■□□□□ 0.13
HDAC6-218ENST00000470942 WRAP53Q9BUR4 548 aaKnown RBP15.85■□□□□ 0.13
HDAC6-218ENST00000470942 TSPAN11A1L157 253 aa15.84■□□□□ 0.13
HDAC6-218ENST00000470942 TTC24A2A3L6 582 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-218ENST00000470942 POM121BA6NF01 834 aa15.84■□□□□ 0.13
HDAC6-218ENST00000470942 MUSKO15146 869 aa15.84■□□□□ 0.13
HDAC6-218ENST00000470942 HYAL3O43820 417 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-218ENST00000470942 MAFKO60675 156 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms