RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 SCNM1Q9BWG6 230 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 ZDHHC6Q9H6R6 413 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 CATSPERBQ9H7T0 1116 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 PREBQ9HCU5 417 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 GDF3Q9NR23 364 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 PCOLCE2Q9UKZ9 415 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 FZD10Q9ULW2 581 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 PCDHGB2Q9Y5G2 931 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 ACTL7AQ9Y615 435 aa16.27■□□□□ 0.2
COL16A1-209ENST00000470799 GOLGA8CPA6NN73 597 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 SLC31A1O15431 190 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 HYAL3O43820 417 aaPredicted RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 RNGTTO60942 597 aaKnown RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 TRIM16O95361 564 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 FGGP02679 453 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 NUDT1P36639 197 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 SSR1P43307 286 aaKnown RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 CCNHP51946 323 aaPredicted RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 COPS2P61201 443 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 SCAPQ12770 1279 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 LONRF2Q1L5Z9 754 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 ZNF423Q2M1K9 1284 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 INAVAQ3KP66 663 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 SETMARQ53H47 684 aaPredicted RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 ARTNQ5T4W7 220 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 NAPEPLDQ6IQ20 393 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 FBXL19Q6PCT2 694 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 ERN2Q76MJ5 926 aaKnown RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 KLK6Q92876 244 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 ARRDC3Q96B67 414 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 RBM41Q96IZ5 413 aaKnown RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 CDC6Q99741 560 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 HECAQ9UBI9 543 aaPredicted RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 DMTF1Q9Y222 760 aa16.26■□□□□ 0.19
COL16A1-209ENST00000470799 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
COL16A1-209ENST00000470799 A0A1W2PQU0 124 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 TLR4O00206 839 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 KRIT1O00522 736 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 WNT9AO14904 365 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 DAPK3O43293 454 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 LATO43561 262 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 LRCH4O75427 683 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 WNT1P04628 370 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 AIF1P55008 147 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 TPI1P60174 286 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 ZNF211Q13398 564 aaPredicted RBP16.25■□□□□ 0.19
COL16A1-209ENST00000470799 ST3GAL2Q16842 350 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 CCDC157Q569K6 752 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 PIP5KL1Q5T9C9 394 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 TRIM69Q86WT6 500 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 SLC13A5Q86YT5 568 aaPredicted RBP16.25■□□□□ 0.19
COL16A1-209ENST00000470799 CHCHD4Q8N4Q1 142 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 RTL3Q8N8U3 475 aaKnown RBP16.25■□□□□ 0.19
COL16A1-209ENST00000470799 PNPLA1Q8N8W4 532 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 NOA1Q8NC60 698 aaKnown RBP16.25■□□□□ 0.19
COL16A1-209ENST00000470799 OR6K2Q8NGY2 324 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 ELF4Q99607 663 aaPredicted RBP16.25■□□□□ 0.19
COL16A1-209ENST00000470799 MYOCQ99972 504 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 PCSK1NQ9UHG2 260 aa16.25■□□□□ 0.19
COL16A1-209ENST00000470799 CACNA1EQ15878 2313 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 GOLGA6L10A0A0M3HER8 536 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 ZSCAN5CA6NGD5 496 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 PRAMEF26H0Y7S4 382 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 NEMP1O14524 444 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 KDELR3O43731 214 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 MAGEC1O60732 1142 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 ITGAVP06756 1048 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 FTH1P19P0C7X4 201 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 GRK6P43250 576 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 ARRB1P49407 418 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 NEK3P51956 506 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 TAS2R38P59533 333 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 SNRPD1P62314 119 aaKnown RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 SLC25A11Q02978 314 aaKnown RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 NEK5Q6P3R8 708 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 ARFGAP1Q8N6T3 406 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 MFSD2AQ8NA29 543 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 FAM131CQ96AQ9 280 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 ISG20Q96AZ6 181 aaKnown RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 DHX35Q9H5Z1 703 aaKnown RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 GPATCH2LQ9NWQ4 482 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 DONSONQ9NYP3 566 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 SMARCAL1Q9NZC9 954 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 AP4E1Q9UPM8 1137 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 WASF2Q9Y6W5 498 aa16.24■□□□□ 0.19
COL16A1-209ENST00000470799 V9GYY5 206 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-209ENST00000470799 TPRP12270 2363 aaKnown RBP16.23■□□□□ 0.19
COL16A1-209ENST00000470799 A0A1B0GTQ1 180 aa16.23■□□□□ 0.19
COL16A1-209ENST00000470799 A0A1W2PR77 199 aa16.23■□□□□ 0.19
COL16A1-209ENST00000470799 FGF10O15520 208 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-209ENST00000470799 PRPSAP2O60256 369 aa16.23■□□□□ 0.19
COL16A1-209ENST00000470799 PCDHGA12O60330 932 aa16.23■□□□□ 0.19
COL16A1-209ENST00000470799 CBFA2T3O75081 653 aa16.23■□□□□ 0.19
COL16A1-209ENST00000470799 ZNF821O75541 412 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-209ENST00000470799 MCM3P25205 808 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms