RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ADGRE3Q9BY15 652 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 VPS37BQ9H9H4 285 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 MRM3Q9HC36 420 aaKnown RBP15.29■□□□□ 0.04
COL4A5-203ENST00000470339 MED4Q9NPJ6 270 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 SYBUQ9NX95 663 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 ELOVL2Q9NXB9 296 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 FAM53CQ9NYF3 392 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 SOX13Q9UN79 622 aa15.29■□□□□ 0.04
COL4A5-203ENST00000470339 MYLKQ15746 1914 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 TTC24A2A3L6 582 aaPredicted RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 TRIM24O15164 1050 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SOCS5O75159 536 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 POLBP06746 335 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 IVLP07476 585 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 ATXN1LP0C7T5 689 aaKnown RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 FOSL2P15408 326 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 ADRA1DP25100 572 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SSTR1P30872 391 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 STX2P32856 288 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 OPRD1P41143 372 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SLC6A11P48066 632 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 STK19P49842 368 aaPredicted RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 RPL26P61254 145 aaKnown RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 ZNF844Q08AG5 666 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 MTM1Q13496 603 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 DLG2Q15700 870 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 CCDC85BQ15834 202 aaPredicted RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 CARD16Q5EG05 197 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SIRPB2Q5JXA9 342 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SPANXN3Q5MJ09 141 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 CERCAMQ5T4B2 595 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 CASC4Q6P4E1 433 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 UNC5AQ6ZN44 842 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SUGP1Q8IWZ8 645 aaKnown RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 EXOC2Q96KP1 924 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 MRGPRX3Q96LB0 322 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 TDRD1Q9BXT4 1180 aaKnown RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 CPEB1Q9BZB8 566 aaKnown RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 ACSS3Q9H6R3 686 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 BRD9Q9H8M2 597 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 GTSE1Q9NYZ3 720 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 PRKAG3Q9UGI9 489 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 RABGEF1Q9UJ41 708 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 RPL26L1Q9UNX3 145 aaKnown RBP15.28■□□□□ 0.04
COL4A5-203ENST00000470339 PLA2G4CQ9UP65 541 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 RAI2Q9Y5P3 530 aa15.28■□□□□ 0.04
COL4A5-203ENST00000470339 GOLGA6L10A6NI86 522 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 WASH3PC4AMC7 463 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 GJB3O75712 270 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 USP1O94782 785 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 ALDH1A2O94788 518 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 POP4O95707 220 aaKnown RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 SHBGP04278 402 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 RAD51Q06609 339 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 MSLNQ13421 630 aaPredicted RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 RASA2Q15283 850 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 SKIV2LQ15477 1246 aaKnown RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 SMAD2Q15796 467 aaKnown RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 KLHL38Q2WGJ6 581 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 MYLK3Q32MK0 819 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 LEXMQ3ZCV2 418 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 CEP85LQ5SZL2 805 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 NLRP9Q7RTR0 991 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 CNPY4Q8N129 248 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 TERB1Q8NA31 727 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 ST13P5Q8NFI4 369 aaPredicted RBP15.27■□□□□ 0.04
COL4A5-203ENST00000470339 GSDMBQ8TAX9 411 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 CSGALNACT1Q8TDX6 532 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 FRS2Q8WU20 508 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 UCMAQ8WVF2 138 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 CFAP36Q96G28 342 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 NSMCE3Q96MG7 304 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 CYTH2Q99418 400 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 CIPCQ9C0C6 399 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 ATP13A3Q9H7F0 1226 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 PLAC1Q9HBJ0 212 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 MOCS1Q9NZB8 636 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 SLCO3A1Q9UIG8 710 aa15.27■□□□□ 0.04
COL4A5-203ENST00000470339 MYO10Q9HD67 2058 aa15.27■□□□□ 0.03
COL4A5-203ENST00000470339 A0A1W2PQ67 120 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 TCRBV9S1A1TA0A576 114 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 HEATR9A2RTY3 570 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 C2CD4DB7Z1M9 353 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 PRRT4C9JH25 899 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 RASGRF2O14827 1237 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 HTRA2O43464 458 aaPredicted RBP15.26■□□□□ 0.03
COL4A5-203ENST00000470339 FZD6O60353 706 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 PAPSS2O95340 614 aaPredicted RBP15.26■□□□□ 0.03
COL4A5-203ENST00000470339 PRLP01236 227 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 MYZAPP0CAP1 466 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 TPH1P17752 444 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 PRKCHP24723 683 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 GRIA2P42262 883 aa15.26■□□□□ 0.03
COL4A5-203ENST00000470339 CHRNA4P43681 627 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms