RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SLC25A51Q9H1U9 297 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 GBA3Q9H227 469 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 HOMER3Q9NSC5 361 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 USP36Q9P275 1121 aaKnown RBP14.94□□□□□ -0.02
COL9A3-209ENST00000469852 RSPH14Q9UHP6 348 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 FBXO4Q9UKT5 387 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 TRHDEQ9UKU6 1024 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 CYP8B1Q9UNU6 501 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 MRFAP1Q9Y605 127 aa14.94□□□□□ -0.02
COL9A3-209ENST00000469852 MYO15AQ9UKN7 3530 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 C16orf96A6NNT2 1141 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 C1QTNF3-AMACRE9PGA6 284 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 AXIN1O15169 862 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 ADH1BP00325 375 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 DNTTP04053 509 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 PRKCGP05129 697 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 PDHA1P08559 390 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 SP9P0CG40 484 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 C5AR1P21730 350 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 HOXA6P31267 233 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 STIP1P31948 543 aaKnown RBP14.93□□□□□ -0.02
COL9A3-209ENST00000469852 RPL22P35268 128 aaKnown RBP14.93□□□□□ -0.02
COL9A3-209ENST00000469852 TPMTP51580 245 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 BCL2L1Q07817 233 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 C2orf54Q08AI8 447 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 SRSF5Q13243 272 aaKnown RBP14.93□□□□□ -0.02
COL9A3-209ENST00000469852 OLIG2Q13516 323 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 PTPRRQ15256 657 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 TRIP13Q15645 432 aaPredicted RBP14.93□□□□□ -0.02
COL9A3-209ENST00000469852 ZNF805Q5CZA5 627 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 FAM124AQ86V42 546 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 KLHL7Q8IXQ5 586 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 HDDC3Q8N4P3 179 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 NELL1Q92832 810 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 LRIG1Q96JA1 1093 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 SMIM14Q96QK8 99 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 FCRL5Q96RD9 977 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 MLPHQ9BV36 600 aaPredicted RBP14.93□□□□□ -0.02
COL9A3-209ENST00000469852 TDRD1Q9BXT4 1180 aaKnown RBP14.93□□□□□ -0.02
COL9A3-209ENST00000469852 NEUROG2Q9H2A3 272 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 SUV39H2Q9H5I1 410 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 ATP13A3Q9H7F0 1226 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 ITM2CQ9NQX7 267 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 RNF14Q9UBS8 474 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 NEU2Q9Y3R4 380 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 RAI2Q9Y5P3 530 aa14.93□□□□□ -0.02
COL9A3-209ENST00000469852 DMDP11532 3685 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 GOLGA6L10A0A0M3HER8 536 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 TSPAN11A1L157 253 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 SPINT1O43278 529 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 HTRA2O43464 458 aaPredicted RBP14.92□□□□□ -0.02
COL9A3-209ENST00000469852 FZD6O60353 706 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 OPHN1O60890 802 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 RNASEH2AO75792 299 aaKnown RBP14.92□□□□□ -0.02
COL9A3-209ENST00000469852 STK10O94804 968 aaKnown RBP14.92□□□□□ -0.02
COL9A3-209ENST00000469852 PRLP01236 227 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 SERPINF2P08697 491 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ACADMP11310 421 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ITIH2P19823 946 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ITGB7P26010 798 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 SERPINA4P29622 427 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 P2RY2P41231 377 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ABL2P42684 1182 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 PTGIRP43119 386 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 MAPK8P45983 427 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 FNTAP49354 379 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 NUBP1P53384 320 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ZBTB16Q05516 673 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 RAD51Q06609 339 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 P3H1Q32P28 736 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 MAP7D1Q3KQU3 841 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 RALGPS1Q5JS13 557 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 PIP5KL1Q5T9C9 394 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 AGBL4Q5VU57 503 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 FAM46CQ5VWP2 391 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 KDELC1Q6UW63 502 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ARHGEF18Q6ZSZ5 1173 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 GSTA5Q7RTV2 222 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ZNF572Q7Z3I7 529 aaPredicted RBP14.92□□□□□ -0.02
COL9A3-209ENST00000469852 KDELC2Q7Z4H8 507 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 WDR5BQ86VZ2 330 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 SPATA4Q8NEY3 305 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ATL2Q8NHH9 583 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 PDCD6IPQ8WUM4 868 aaKnown RBP14.92□□□□□ -0.02
COL9A3-209ENST00000469852 FAM131CQ96AQ9 280 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 ECHDC3Q96DC8 303 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 FERMT1Q9BQL6 677 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 FBXL12Q9NXK8 326 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 GGT7Q9UJ14 662 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 CHKBQ9Y259 395 aa14.92□□□□□ -0.02
COL9A3-209ENST00000469852 IGHV1OR15-9A0A0B4J2B8 117 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 H0Y858 1186 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 SOCS5O75159 536 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 PMPCBO75439 489 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 IGLV3-19P01714 112 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 TIMP2P16035 220 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 BCKDHBP21953 392 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 CES1P23141 567 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms