RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GOLGA8RI6L899 631 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 K7ERQ8 282 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 PRPF4O43172 522 aaKnown RBP eCLIP19.14■□□□□ 0.66
SMC4-209ENST00000468653 HLA-FP30511 346 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 GP5P40197 560 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 SLC20A2Q08357 652 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 BMPR2Q13873 1038 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 MPP2Q14168 576 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 TEDDM1Q5T9Z0 273 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 MROH9Q5TGP6 573 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 GPR149Q86SP6 731 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 METTL3Q86U44 580 aaKnown RBP19.14■□□□□ 0.66
SMC4-209ENST00000468653 ALKBH8Q96BT7 664 aaKnown RBP19.14■□□□□ 0.66
SMC4-209ENST00000468653 SERAC1Q96JX3 654 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 NSMCE3Q96MG7 304 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 KLF6Q99612 283 aaPredicted RBP19.14■□□□□ 0.66
SMC4-209ENST00000468653 SSU72Q9NP77 194 aaKnown RBP19.14■□□□□ 0.66
SMC4-209ENST00000468653 IARS2Q9NSE4 1012 aaKnown RBP19.14■□□□□ 0.66
SMC4-209ENST00000468653 DUS2Q9NX74 493 aaKnown RBP19.14■□□□□ 0.66
SMC4-209ENST00000468653 SLC2A6Q9UGQ3 507 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 PSAT1Q9Y617 370 aa19.14■□□□□ 0.66
SMC4-209ENST00000468653 VAPBO95292 243 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 GLP2RO95838 553 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 ALADP13716 330 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 VIPR2P41587 438 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 HYAL1Q12794 435 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 MSLNQ13421 630 aaPredicted RBP19.14■□□□□ 0.65
SMC4-209ENST00000468653 LAMB3Q13751 1172 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 CNGA3Q16281 694 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 TCEAL5Q5H9L2 206 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 FAM78AQ5JUQ0 283 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 ATXN7L2Q5T6C5 722 aaPredicted RBP19.14■□□□□ 0.65
SMC4-209ENST00000468653 TSTD2Q5T7W7 516 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 GRTP1Q5TC63 336 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 NCEH1Q6PIU2 408 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 GET4Q7L5D6 327 aaPredicted RBP19.14■□□□□ 0.65
SMC4-209ENST00000468653 BLOC1S5Q8TDH9 187 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 DYDC1Q8WWB3 177 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 FGF13Q92913 245 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 RMDN1Q96DB5 314 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 TRIB3Q96RU7 358 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 AGAP2Q99490 1192 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 TDRD1Q9BXT4 1180 aaKnown RBP19.14■□□□□ 0.65
SMC4-209ENST00000468653 TREX1Q9NSU2 369 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 GGA2Q9UJY4 613 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 PCDHGC4Q9Y5F7 938 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 RAI2Q9Y5P3 530 aa19.14■□□□□ 0.65
SMC4-209ENST00000468653 MYO9BQ13459 2157 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 LINC01565O15544 149 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 PABPC1P11940 636 aaKnown RBP19.13■□□□□ 0.65
SMC4-209ENST00000468653 CA4P22748 312 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 LRRC14Q15048 493 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 FUT11Q495W5 492 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 RALGPS1Q5JS13 557 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 ASTLQ6HA08 431 aaPredicted RBP19.13■□□□□ 0.65
SMC4-209ENST00000468653 TMEM184AQ6ZMB5 413 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 NLRP9Q7RTR0 991 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 STRA8Q7Z7C7 330 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 SRLQ86TD4 932 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 TAX1BP1Q86VP1 789 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 CNPY4Q8N129 248 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 EFHBQ8N7U6 833 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 SMARCD2Q92925 531 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 LRRC3BQ96PB8 259 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 TM6SF2Q9BZW4 377 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 MARK1Q9P0L2 795 aa19.13■□□□□ 0.65
SMC4-209ENST00000468653 GOLGA8TH3BQL2 631 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 SMAD6O43541 496 aaKnown RBP19.12■□□□□ 0.65
SMC4-209ENST00000468653 PYGBP11216 843 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 THOC5Q13769 683 aaKnown RBP19.12■□□□□ 0.65
SMC4-209ENST00000468653 KIAA0930Q6ICG6 404 aaPredicted RBP19.12■□□□□ 0.65
SMC4-209ENST00000468653 ANKRD54Q6NXT1 300 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 KIAA1958Q8N8K9 716 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 PDCD6IPQ8WUM4 868 aaKnown RBP19.12■□□□□ 0.65
SMC4-209ENST00000468653 ATXN2LQ8WWM7 1075 aaKnown RBP19.12■□□□□ 0.65
SMC4-209ENST00000468653 RSPRY1Q96DX4 576 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 ASB16Q96NS5 453 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 ADGRE3Q9BY15 652 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 MLXIPLQ9NP71 852 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 NSMCE4AQ9NXX6 385 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 MYOFQ9NZM1 2061 aa19.12■□□□□ 0.65
SMC4-209ENST00000468653 RANBP2P49792 3224 aaKnown RBP19.12■□□□□ 0.65
SMC4-209ENST00000468653 CXorf51AA0A1B0GTR3 108 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 MROH6A6NGR9 719 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 TYROBPO43914 113 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 PAPSS2O95340 614 aaPredicted RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 RPA3P35244 121 aaPredicted RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 CTSOP43234 321 aaPredicted RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 SLC18A1P54219 525 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 AP1S1P61966 158 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 DHCR24Q15392 516 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 NAT16Q8N8M0 369 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 BANPQ8N9N5 519 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 LPCAT1Q8NF37 534 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 BPIFB1Q8TDL5 484 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 OSCP1Q8WVF1 389 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 SGSM3Q96HU1 749 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 RPL10LQ96L21 214 aaKnown RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 GDE1Q9NZC3 331 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms