RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 RACK1P63244 317 aaKnown RBP20.25■□□□□ 0.83
NPHP4-206ENST00000468253 PPIDQ08752 370 aaKnown RBP20.25■□□□□ 0.83
NPHP4-206ENST00000468253 SF3A2Q15428 464 aaKnown RBP20.25■□□□□ 0.83
NPHP4-206ENST00000468253 CCDC6Q16204 474 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 BRAT1Q6PJG6 821 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 PARS2Q7L3T8 475 aaKnown RBP20.25■□□□□ 0.83
NPHP4-206ENST00000468253 PEX26Q7Z412 305 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 CCNYQ8ND76 341 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 OLFM3Q96PB7 478 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 ZDHHC5Q9C0B5 715 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 TRIM10Q9UDY6 481 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 HEY1Q9Y5J3 304 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 hCG_1818297A0A087WSY0 165 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 A0A0U1RQJ8 604 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 AREL1O15033 823 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 RNGTTO60942 597 aaKnown RBP20.24■□□□□ 0.83
NPHP4-206ENST00000468253 SYPP08247 313 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 CCNB1P14635 433 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 SERPINA4P29622 427 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 MARCKSL1P49006 195 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 AFF3P51826 1226 aaKnown RBP20.24■□□□□ 0.83
NPHP4-206ENST00000468253 POLR2LP62875 67 aaKnown RBP20.24■□□□□ 0.83
NPHP4-206ENST00000468253 BCL2L1Q07817 233 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 ALG1LQ6GMV1 187 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 HORMAD1Q86X24 394 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 CCDC13Q8IYE1 715 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 PGBD5Q8N414 524 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 UBL4BQ8N7F7 174 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 ASB12Q8WXK4 309 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 ECHDC3Q96DC8 303 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 EXOC2Q96KP1 924 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 MIR1-1HGQ9H1L0 117 aa20.24■□□□□ 0.83
NPHP4-206ENST00000468253 RBM22Q9NW64 420 aaKnown RBP eCLIP20.24■□□□□ 0.83
NPHP4-206ENST00000468253 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.24■□□□□ 0.83
NPHP4-206ENST00000468253 PATE3B3GLJ2 98 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 PPP1R12AO14974 1030 aaPredicted RBP20.23■□□□□ 0.83
NPHP4-206ENST00000468253 KRT10P13645 584 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 RPS21P63220 83 aaKnown RBP20.23■□□□□ 0.83
NPHP4-206ENST00000468253 KIAA1161Q6NSJ0 714 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 BBS12Q6ZW61 710 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 CAMK1DQ8IU85 385 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 SNX19Q92543 992 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 PDLIM2Q96JY6 352 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 LGMNQ99538 433 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 SMOC1Q9H4F8 434 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 EBF2Q9HAK2 575 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 NOD2Q9HC29 1040 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 TM9SF3Q9HD45 589 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 GUCA1BQ9UMX6 200 aa20.23■□□□□ 0.83
NPHP4-206ENST00000468253 CFAP54Q96N23 3096 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 A0A1W2PQU0 124 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 TRAFD1O14545 582 aaPredicted RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 ARHGAP33O14559 1287 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 HTRA2O43464 458 aaPredicted RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 SOCS5O75159 536 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 PCDH8O95206 1070 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 CFIP05156 583 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 IFI35P80217 286 aaPredicted RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 TEAD4Q15561 434 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 UGP2Q16851 508 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 ZNF284Q2VY69 593 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 AASDHQ4L235 1098 aaPredicted RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 TMEM259Q4ZIN3 620 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 SETMARQ53H47 684 aaPredicted RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 CCDC50Q8IVM0 306 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 ZCCHC9Q8N567 271 aaKnown RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 NETO1Q8TDF5 533 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 P3H4Q92791 437 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 SKA1Q96BD8 255 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 HES6Q96HZ4 224 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 IL12RB2Q99665 862 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 POLR1EQ9GZS1 481 aaKnown RBP20.22■□□□□ 0.83
NPHP4-206ENST00000468253 NT5MQ9NPB1 228 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 SCUBE2Q9NQ36 999 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 ATP8A1Q9Y2Q0 1164 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 CEP250Q9BV73 2442 aa20.22■□□□□ 0.83
NPHP4-206ENST00000468253 LNP1A1A4G5 178 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 CFAP69A5D8W1 941 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 PRAMEF26H0Y7S4 382 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 MAP3K6O95382 1288 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 PIGNO95427 931 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 JCHAINP01591 159 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 ABL2P42684 1182 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 GRIA4P48058 902 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 PPP2CBP62714 309 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 DYNLT1P63172 113 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 PPP2CAP67775 309 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 ADCY2Q08462 1091 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 ELP6Q0PNE2 266 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 OVGP1Q12889 678 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 XRCC4Q13426 336 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 KAZNQ674X7 775 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 TCEAL6Q6IPX3 200 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 IL27RAQ6UWB1 636 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 NPNTQ6UXI9 565 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 IQCHQ86VS3 1027 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 FAM174AQ8TBP5 190 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 ALG3Q92685 438 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 TCEAL3Q969E4 200 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 NSMCE3Q96MG7 304 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms