RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 STMN1P16949 149 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 ENTPD1P49961 510 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 PRKCQQ04759 706 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 NAPEPLDQ6IQ20 393 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 C8orf82Q6P1X6 216 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 ZBTB49Q6ZSB9 765 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 ANKFN1Q8N957 763 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 OR9I1Q8NGQ6 314 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 MIPOL1Q8TD10 442 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC8A2Q9UPR5 921 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 UBDO15205 165 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 GNAO1P09471 354 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 GJA9P57773 515 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 DNAJB13P59910 316 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 PPP4R4Q6NUP7 873 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 ESRP1Q6NXG1 681 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 PKN3Q6P5Z2 889 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 ALKAL1Q6UXT8 129 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 LZTR1Q8N653 840 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 SPATA22Q8NHS9 363 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 CANT1Q8WVQ1 401 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 MRPL57Q9BQC6 102 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 NXF3Q9H4D5 531 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 MEAF6Q9HAF1 191 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 CYP4F12Q9HCS2 524 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 SFMBT1Q9UHJ3 866 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 MRASO14807 208 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 MTSS1O43312 755 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 SNRPB2P08579 225 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ATP6V1B2P21281 511 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ATP5F1P24539 256 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 PRAMEP78395 509 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 SCAPQ12770 1279 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 KCTD2Q14681 263 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 POU6F1Q14863 301 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 MAPRE2Q15555 327 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ELMSAN1Q6PJG2 1045 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNF554Q86TJ5 538 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 USP33Q8TEY7 942 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 NTAN1Q96AB6 310 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 PPWD1Q96BP3 646 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC9A7Q96T83 725 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 IGSF5Q9NSI5 407 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 RECQL4O94761 1208 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 BMP2P12643 396 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 NPR3P17342 541 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 AKAP5P24588 427 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC1A2P43004 574 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 HCAR3P49019 387 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 TMEM62Q0P6H9 643 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 LAMC2Q13753 1193 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 UGP2Q16851 508 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 MOB2Q70IA6 237 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 LIMS2Q7Z4I7 341 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 CLVS1Q8IUQ0 354 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 GPC2Q8N158 579 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 TRPC4APQ8TEL6 797 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ISOC1Q96CN7 298 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 CELF6Q96J87 481 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ELMO2Q96JJ3 720 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 GOLGA2P5Q9HBQ8 144 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 GDAP2Q9NXN4 497 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNHIT2Q9UHR6 403 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 FBXW11Q9UKB1 542 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 CROTQ9UKG9 612 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 FAF1Q9UNN5 650 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
PDZRN3-205ENST00000466780 YJEFN3A6XGL0 299 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 AURKAO14965 403 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 TKTL1P51854 596 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC7A2P52569 658 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 KCTD21Q4G0X4 260 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 PCID2Q5JVF3 399 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SAMD4BQ5PRF9 694 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM45BPQ6NSW5 357 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 Q6ZNX1 250 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms