RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 SSU72Q9NP77 194 aaKnown RBP9.64□□□□□ -0.87
SRPRB-202ENST00000466636 SPHK2Q9NRA0 654 aa9.64□□□□□ -0.87
SRPRB-202ENST00000466636 TREX1Q9NSU2 369 aa9.64□□□□□ -0.87
SRPRB-202ENST00000466636 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.64□□□□□ -0.87
SRPRB-202ENST00000466636 WNT6Q9Y6F9 365 aa9.64□□□□□ -0.87
SRPRB-202ENST00000466636 IKBKGQ9Y6K9 419 aa9.64□□□□□ -0.87
SRPRB-202ENST00000466636 HEATR9A2RTY3 570 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 TRIM49D1C9J1S8 452 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 NEDD8-MDP1E9PL57 170 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 K7ERQ8 282 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SLC9A3R1O14745 358 aaPredicted RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 LINC01565O15544 149 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 PRPF4O43172 522 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 TYROBPO43914 113 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 NDST3O95803 873 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 MT-CO1P00395 513 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 PRLP01236 227 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 FGF1P05230 155 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SNRPAP09012 282 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ARNTP27540 789 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 HLA-FP30511 346 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ARCN1P48444 511 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SCNN1BP51168 640 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SLC18A1P54219 525 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SMAD1Q15797 465 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 FUT11Q495W5 492 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 TCEAL5Q5H9L2 206 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 RALGPS1Q5JS13 557 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 FAM78AQ5JUQ0 283 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 LY6G5CQ5SRR4 150 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 TEDDM1Q5T9Z0 273 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 KIAA0930Q6ICG6 404 aaPredicted RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 RETSATQ6NUM9 610 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ESRP1Q6NXG1 681 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ANKRD54Q6NXT1 300 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SYCE2Q6PIF2 218 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 KIAA0907Q7Z7F0 614 aaPredicted RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 KCNMB4Q86W47 210 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 RNF135Q8IUD6 432 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 TDHQ8IZJ6 230 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ADGRG2Q8IZP9 1017 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 C4orf33Q8N1A6 199 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 EFHBQ8N7U6 833 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 DENND1AQ8TEH3 1009 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 PPP2R3CQ969Q6 453 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 IFT43Q96FT9 208 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SMC6Q96SB8 1091 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 BBS2Q9BXC9 721 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 TDRD1Q9BXT4 1180 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 NSUN3Q9H649 340 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 IGFLR1Q9H665 355 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 C20orf96Q9NUD7 363 aaPredicted RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ABCB8Q9NUT2 735 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 IL1RAPL1Q9NZN1 696 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SLC2A6Q9UGQ3 507 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 SMG5Q9UPR3 1016 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 FCF1Q9Y324 198 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 PSAT1Q9Y617 370 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 OBSL1O75147 1896 aa9.63□□□□□ -0.87
SRPRB-202ENST00000466636 MKI67P46013 3256 aaKnown RBP9.63□□□□□ -0.87
SRPRB-202ENST00000466636 ANAPC1Q9H1A4 1944 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 CCDC78A2IDD5 438 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 MROH6A6NGR9 719 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 FAM47DPA6NHR8 397 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SMAD6O43541 496 aaKnown RBP9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SIN3BO75182 1162 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SPAG7O75391 227 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 RFPL1O75677 317 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 KRT37O76014 449 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 KRT38O76015 456 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 PAPSS2O95340 614 aaPredicted RBP9.62□□□□□ -0.87
SRPRB-202ENST00000466636 MT-ND3P03897 115 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 PABPC1P11940 636 aaKnown RBP9.62□□□□□ -0.87
SRPRB-202ENST00000466636 ALADP13716 330 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 TYRP14679 529 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 KRT4P19013 534 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 CNTFP26441 200 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 LSP1P33241 339 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 GP5P40197 560 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 CCNFP41002 786 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 VIPR2P41587 438 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 CSNK1DP48730 415 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 RHOAP61586 193 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 AP1S1P61966 158 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SLC18A2Q05940 514 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SLC20A2Q08357 652 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 TRAF2Q12933 501 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 BMPR2Q13873 1038 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 SEPT6Q14141 434 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 GALNT3Q14435 633 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 ATXN7L2Q5T6C5 722 aaPredicted RBP9.62□□□□□ -0.87
SRPRB-202ENST00000466636 TSTD2Q5T7W7 516 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 LGSNQ5TDP6 509 aa9.62□□□□□ -0.87
SRPRB-202ENST00000466636 PDPK2PQ6A1A2 396 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms