RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LRRC72A6NJI9 287 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 PLRG1O43660 514 aaKnown RBP14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 ZNF189O75820 626 aaPredicted RBP14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 ADRB3P13945 408 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 ADPRHP54922 357 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 NIPAL4Q0D2K0 466 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 LPAL2Q16609 132 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 SPDYCQ5MJ68 293 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 CFAP58Q5T655 872 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 PID1Q7Z2X4 250 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 RASGEF1CQ8N431 466 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 CADM4Q8NFZ8 388 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 OR2T34Q8NGX1 318 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 SLC35B2Q8TB61 432 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 ATG4AQ8WYN0 398 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 NAPGQ99747 312 aaPredicted RBP14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 KDM4CQ9H3R0 1056 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 USP29Q9HBJ7 922 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 GLOD4Q9HC38 313 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 KLHL8Q9P2G9 620 aaPredicted RBP14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 DNPEPQ9ULA0 475 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 PCDHGC4Q9Y5F7 938 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 WDFY4Q6ZS81 3184 aa14.6□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3DA0A087WVF3 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3IA0A087WXS9 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3EA0A087X179 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3KA0A087X1G2 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TSPAN11A1L157 253 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3FA6NER0 549 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3LB9A6J9 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 CES2O00748 559 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TRAFD1O14545 582 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 KCNN4O15554 427 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 HTRA2O43464 458 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 LIASO43766 372 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 SOCS5O75159 536 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 SERPINF2P08697 491 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3HP0C7X1 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TIMP2P16035 220 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TCP1P17987 556 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 ABL2P42684 1182 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 DHPSP49366 369 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TAS2R38P59533 333 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TRAF2Q12933 501 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 SIX1Q15475 284 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3GQ6DHY5 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3CQ6IPX1 549 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 BRAT1Q6PJG6 821 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TTC7BQ86TV6 843 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TBC1D3Q8IZP1 549 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 ZNF567Q8N184 647 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 PAF1Q8N7H5 531 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 SUMF1Q8NBK3 374 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 COG1Q8WTW3 980 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 C1orf54Q8WWF1 131 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 FOXJ1Q92949 421 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 RAB7BQ96AH8 199 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 ECHDC3Q96DC8 303 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 MS4A14Q96JA4 679 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 PCED1AQ9H1Q7 454 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 SLC25A51Q9H1U9 297 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 C6orf106Q9H6K1 298 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TRHDEQ9UKU6 1024 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 SMG5Q9UPR3 1016 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 ZKSCAN5Q9Y2L8 839 aa14.59□□□□□ -0.07
DNMT3A-208ENST00000466601 A0A1W2PQ67 120 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 CTAGE9A4FU28 777 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PRR23AA6NEV1 266 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 METTL12A8MUP2 240 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PROB1E7EW31 1015 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 STK10O94804 968 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 LMNAP02545 664 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 MMP2P08253 660 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PRLRP16471 622 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 XPAP23025 273 aaPredicted RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 CD68P34810 354 aaPredicted RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 CD86P42081 329 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PTGER3P43115 390 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 SKOR1P84550 965 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 SNX1Q13596 522 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 IHHQ14623 411 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 CCNG2Q16589 344 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 UGP2Q16851 508 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 ARMC12Q5T9G4 340 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PAPD7Q5XG87 772 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 KIAA0895LQ68EN5 471 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 ARMCX6Q7L4S7 300 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 ZSWIM9Q86XI8 627 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 SLC41A1Q8IVJ1 513 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 ABCA7Q8IZY2 2146 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PDCD6IPQ8WUM4 868 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 NKD2Q969F2 451 aaPredicted RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 IMP4Q96G21 291 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 HSPA12BQ96MM6 686 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 RBM15Q96T37 977 aaKnown RBP eCLIP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 PHOX2BQ99453 314 aa14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 NAP1L3Q99457 506 aaPredicted RBP14.58□□□□□ -0.08
DNMT3A-208ENST00000466601 TMEM121Q9BTD3 319 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms