RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SLC30A4O14863 429 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TM4SF5O14894 197 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 HTRA2O43464 458 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 RNGTTO60942 597 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 FSBPO95073 299 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZRANB2O95218 330 aaKnown RBP eCLIP9.58□□□□□ -0.885e-10■■■■□ 24.6
SDCCAG3-208ENST00000466579 TBC1D3HP0C7X1 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TIMP2P16035 220 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 SDHBP21912 280 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ABL2P42684 1182 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 MMP13P45452 471 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 GRIA4P48058 902 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 NR2C2P49116 596 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 AFF3P51826 1226 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 RACK1P63244 317 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 BNC1Q01954 994 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TFDP2Q14188 446 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZNF284Q2VY69 593 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TFDP3Q5H9I0 405 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 MARC1Q5VT66 337 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3GQ6DHY5 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3CQ6IPX1 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 KIAA1161Q6NSJ0 714 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 BRAT1Q6PJG6 821 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 HORMAD1Q86X24 394 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3Q8IZP1 549 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 BBS5Q8N3I7 341 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 RYBPQ8N488 228 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZCCHC9Q8N567 271 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 C12orf50Q8NA57 414 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ASB12Q8WXK4 309 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 RBM41Q96IZ5 413 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 EXOC2Q96KP1 924 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 KLHL32Q96NJ5 620 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 IL12RB2Q99665 862 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 NUSAP1Q9BXS6 441 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 MAK16Q9BXY0 300 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZDHHC5Q9C0B5 715 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 BRD8Q9H0E9 1235 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 SUV39H2Q9H5I1 410 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ATP13A3Q9H7F0 1226 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TRIM10Q9UDY6 481 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZFR2Q9UPR6 939 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TP53BP1Q12888 1972 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 LRRK1Q38SD2 2015 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 A0A1W2PQ67 120 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 A0A1W2PQU0 124 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 FAM47DPA6NHR8 397 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 MIF4GDA9UHW6 222 aaKnown RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ARHGAP33O14559 1287 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 VILLO15195 856 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 TSPAN6O43657 245 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 GDF9O60383 454 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 SOCS5O75159 536 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 GJB3O75712 270 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 PIGNO95427 931 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 SYPP08247 313 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ENGP17813 658 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 TGM2P21980 687 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 CES1P23141 567 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 SERPINA4P29622 427 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 RPS21P63220 83 aaKnown RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 IFI35P80217 286 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ADCY2Q08462 1091 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZNF235Q14590 738 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 PDK1Q15118 436 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 TMEM52BQ4KMG9 183 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 AASDHQ4L235 1098 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 SETMARQ53H47 684 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZFYVE27Q5T4F4 411 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 STPG1Q5TH74 334 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 NAPEPLDQ6IQ20 393 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 FBXL19Q6PCT2 694 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 BBS12Q6ZW61 710 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 BZW1Q7L1Q6 419 aaKnown RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 PRPF39Q86UA1 669 aaKnown RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 IQCHQ86VS3 1027 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZSWIM9Q86XI8 627 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 RFX6Q8HWS3 928 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 CAMK1DQ8IU85 385 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 CCDC13Q8IYE1 715 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 SYCE1Q8N0S2 351 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 TMEM145Q8NBT3 493 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 NSMCE1Q8WV22 266 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ALG3Q92685 438 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 HES6Q96HZ4 224 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 FEM1CQ96JP0 617 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 PDLIM2Q96JY6 352 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 LENG8Q96PV6 779 aaPredicted RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 EDEM2Q9BV94 578 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 DNAAF2Q9NVR5 837 aaKnown RBP9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ATP8A1Q9Y2Q0 1164 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 DNAH14Q0VDD8 3507 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms