RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 TIPARPQ7Z3E1 657 aaKnown RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 FAM114A1Q8IWE2 563 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 TRIM59Q8IWR1 403 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 SLC25A45Q8N413 288 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 FBXL16Q8N461 479 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 LRRC52Q8N7C0 313 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 TEX19Q8NA77 164 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 CACTINQ8WUQ7 758 aaKnown RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 MYLPFQ96A32 169 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 ARRDC3Q96B67 414 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 APOLD1Q96LR9 279 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 OMDQ99983 421 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 SYT15Q9BQS2 421 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 SLC2A11Q9BYW1 496 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 ELOVL4Q9GZR5 314 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 PABPC3Q9H361 631 aaKnown RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 ZNF71Q9NQZ8 489 aaPredicted RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 GJB4Q9NTQ9 266 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 KLHL11Q9NVR0 708 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 COMMD8Q9NX08 183 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 GDAP2Q9NXN4 497 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 PLK2Q9NYY3 685 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 CHORDC1Q9UHD1 332 aaPredicted RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 TMEFF2Q9UIK5 374 aaPredicted RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 FZD4Q9ULV1 537 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 DMTF1Q9Y222 760 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 SNX9Q9Y5X1 595 aa6.08□□□□□ -1.44
NCL-208ENST00000466274 UTP20O75691 2785 aaKnown RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 SPTBN1Q01082 2364 aaKnown RBP6.08□□□□□ -1.44
NCL-208ENST00000466274 LRBAP50851 2863 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 SETD2Q9BYW2 2564 aaPredicted RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 A0A0B4J269 797 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 SLC12A8A0AV02 714 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 CPED1A4D0V7 1026 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 WIPF3A6NGB9 483 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 SCAMP1O15126 338 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 MATN3O15232 486 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 HNRNPRO43390 633 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 RNASEH2AO75792 299 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 IL18RAPO95256 599 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 PENKP01210 267 aaPredicted RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 PRKCGP05129 697 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ATP5BP06576 529 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 CENPBP07199 599 aaPredicted RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 ZNF20P17024 532 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 TGM2P21980 687 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 VAMP1P23763 118 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 PDIA3P30101 505 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 KRT2P35908 639 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ATP5C1P36542 298 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 CCT6AP40227 531 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 RBP5P82980 135 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ZNF177Q13360 481 aaPredicted RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 SPIDRQ14159 915 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 DHX8Q14562 1220 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 ADCK5Q3MIX3 580 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 FAM26FQ5R3K3 315 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 PRR31Q5SQ13 230 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 SLFN12LQ6IEE8 588 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ZCCHC8Q6NZY4 707 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 BLOC1S2Q6QNY1 142 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 RAB11FIP2Q7L804 512 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 LIMS2Q7Z4I7 341 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 TADA2BQ86TJ2 420 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 SPATS2Q86XZ4 545 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 LGI4Q8N135 537 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 MYCBPAPQ8TBZ2 947 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 WFIKKN2Q8TEU8 576 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 HTR3CQ8WXA8 447 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 WASF1Q92558 559 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 TMEM159Q96B96 161 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ANAPC16Q96DE5 110 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 PIWIL1Q96J94 861 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 TMEM245Q9H330 911 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 CCSER2Q9H7U1 834 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 NCOA5Q9HCD5 579 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 PRDM8Q9NQV8 689 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 LARSQ9P2J5 1176 aaKnown RBP6.07□□□□□ -1.44
NCL-208ENST00000466274 AGAP1Q9UPQ3 857 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
NCL-208ENST00000466274 ATP8B3O60423 1300 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 ABCA2Q9BZC7 2435 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3DA0A087WVF3 549 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3IA0A087WXS9 549 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3EA0A087X179 549 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3KA0A087X1G2 549 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3FA6NER0 549 aaPredicted RBP6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3LB9A6J9 549 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 PRAMEF26H0Y7S4 382 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 WNT9AO14904 365 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBX1O43435 398 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 AKAP8O43823 692 aaKnown RBP6.06□□□□□ -1.44
NCL-208ENST00000466274 FAM189A1O60320 539 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TLR5O60602 858 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 TBC1D3HP0C7X1 549 aa6.06□□□□□ -1.44
NCL-208ENST00000466274 UGT1A5P35504 534 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms