RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 BAP1Q92560 729 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 FGF11Q92914 225 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 CENPTQ96BT3 561 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 VCPIP1Q96JH7 1222 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 GBP4Q96PP9 640 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 KLC2Q9H0B6 622 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 CATSPERBQ9H7T0 1116 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 CAAP1Q9H8G2 361 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 NCKIPSDQ9NZQ3 722 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 IPO11Q9UI26 975 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 SALL4Q9UJQ4 1053 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 ITM2BQ9Y287 266 aa12.63□□□□□ -0.39
SOX2-OT-203ENST00000466034 RASA4BC9J798 803 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 TPP1O14773 563 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 RRP8O43159 456 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 AQP9O43315 295 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 RASA4O43374 803 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 BRINP1O60477 761 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 ACTN2P35609 894 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 EIF2B5Q13144 721 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 PTK2BQ14289 1009 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 ACAP1Q15027 740 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 TBC1D25Q3MII6 688 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 TPRG1LQ5T0D9 272 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 SCYL2Q6P3W7 929 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 LEKR1Q6ZMV7 388 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 LRRC69Q6ZNQ3 347 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 MCEEQ96PE7 176 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 SYT11Q9BT88 431 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 C1QTNF7Q9BXJ2 289 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 PRORYQ9H606 182 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 SEPT11Q9NVA2 429 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 DONSONQ9NYP3 566 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 LHX3Q9UBR4 397 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 KLF15Q9UIH9 416 aa12.62□□□□□ -0.39
SOX2-OT-203ENST00000466034 COL27A1Q8IZC6 1860 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 TSPAN11A1L157 253 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 EIF3CLB5ME19 914 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 CREB3O43889 395 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 NEBLO76041 1014 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 TM7SF2O76062 418 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 TIMP2P16035 220 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 JUNDP17535 347 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 DESP17661 470 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 IGFALSP35858 605 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 RHOAP61586 193 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 GRM3Q14832 879 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 CYTH1Q15438 398 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 TMEM52BQ4KMG9 183 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 DCUN1D2Q6PH85 259 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 KDM7AQ6ZMT4 941 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 TTC7BQ86TV6 843 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 ZNF354CQ86Y25 554 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 DNAAF5Q86Y56 855 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 TP53I13Q8NBR0 393 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 IFI44Q8TCB0 444 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 CXorf40AQ8TE69 158 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 CRELD1Q96HD1 420 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 BBC3Q96PG8 261 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 EIF3CQ99613 913 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 LRRC19Q9H756 370 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 PCDHB1Q9Y5F3 818 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 BPTFQ12830 3046 aa12.61□□□□□ -0.39
SOX2-OT-203ENST00000466034 EME2A4GXA9 379 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 MMP20O60882 483 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 ITPKBP27987 946 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 PEX5P50542 639 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 NDST2P52849 883 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 THOP1P52888 689 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 OGDHQ02218 1023 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 AGERQ15109 404 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 PLEKHA7Q6IQ23 1121 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 MACC1Q6ZN28 852 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 LSMEM2Q8N112 164 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 TPCN2Q8NHX9 752 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 MAPK15Q8TD08 544 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 LMX1AQ8TE12 382 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 GRAMD1AQ96CP6 724 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 ZNF578Q96N58 590 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 UBA2Q9UBT2 640 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-203ENST00000466034 APOBEC3BQ9UH17 382 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms