RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 CARSP49589 748 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 SERPINH1P50454 418 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 SUOXP51687 545 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 GDF10P55107 478 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 VSNL1P62760 191 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 POLR2LP62875 67 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 LMAN2Q12907 356 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 HTR4Q13639 388 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 KCNJ11Q14654 390 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ZSCAN26Q16670 478 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 FBXO43Q4G163 708 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 PITRM1Q5JRX3 1037 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ALS2CLQ60I27 953 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 MBLAC2Q68D91 279 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 LRRC8BQ6P9F7 803 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 VITQ6UXI7 678 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 HDXQ7Z353 690 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 RALGPS2Q86X27 583 aaPredicted RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ETFBKMTQ8IXQ9 262 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 RAVER1Q8IY67 606 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 TTC16Q8NEE8 873 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CCDC110Q8TBZ0 833 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 FBXO25Q8TCJ0 367 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 AENQ8WTP8 325 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 SCG3Q8WXD2 468 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CPT1BQ92523 772 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ALG14Q96F25 216 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 IFT43Q96FT9 208 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 IMP4Q96G21 291 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 FEM1CQ96JP0 617 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 LMLNQ96KR4 655 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 GDAP1L1Q96MZ0 367 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ZNF641Q96N77 438 aaPredicted RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 AGAP3Q96P47 875 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 RUFY1Q96T51 708 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 PNKPQ96T60 521 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 USB1Q9BQ65 265 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 TRIM51Q9BSJ1 452 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 OSBPL1AQ9BXW6 950 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CPEB1Q9BZB8 566 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 TRIM31Q9BZY9 425 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 IL22Q9GZX6 179 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 SMG9Q9H0W8 520 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 DPH5Q9H2P9 285 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 LINC00597Q9H2U6 94 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 TRABDQ9H4I3 376 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ETNK1Q9HBU6 452 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ZDHHC18Q9NUE0 388 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 NDFIP2Q9NV92 336 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 DNAJC17Q9NVM6 304 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 GRHL1Q9NZI5 618 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 HACD3Q9P035 362 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 SUN2Q9UH99 717 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 VPS51Q9UID3 782 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 RIMKLBQ9ULI2 386 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 NFU1Q9UMS0 254 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 STARD13Q9Y3M8 1113 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 MFHAS1Q9Y4C4 1052 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 WNT6Q9Y6F9 365 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CHD9Q3L8U1 2897 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CHD7Q9P2D1 2997 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 C2orf16Q68DN1 1984 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CHD5Q8TDI0 1954 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 SDR42E2A6NKP2 422 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 J3KR12 359 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 SOX1O00570 391 aaPredicted RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 MAN2B1O00754 1011 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 OIP5O43482 229 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 TULP3O75386 442 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 ABHD2P08910 425 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CISD3P0C7P0 127 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 ALADP13716 330 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 HNRNPLP14866 589 aaKnown RBP eCLIP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 PAMP19021 973 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CR2P20023 1033 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 DRD1P21728 446 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 VARSP26640 1264 aaKnown RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 MZF1P28698 734 aaPredicted RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 SERPINA4P29622 427 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 HLA-FP30511 346 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 VPS41P49754 854 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CORO7P57737 925 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 RHOAP61586 193 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 ARF5P84085 180 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CDK18Q07002 472 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 DLX2Q07687 328 aaPredicted RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 ITKQ08881 620 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 SLC10A7Q0GE19 358 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 FRG1Q14331 258 aaKnown RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 TRIP13Q15645 432 aaPredicted RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CCDC38Q502W7 563 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 BEND6Q5SZJ8 279 aaPredicted RBP6.08□□□□□ -1.44
CHMP3-206ENST00000466032 KCTD11Q693B1 232 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 SDE2Q6IQ49 451 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 BRAT1Q6PJG6 821 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 DSG4Q86SJ6 1040 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 PALM2Q8IXS6 379 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 LMNTD2Q8IXW0 634 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 SH2D3CQ8N5H7 860 aa6.08□□□□□ -1.44
CHMP3-206ENST00000466032 CNTD1Q8N815 330 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms