RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 NEU2Q9Y3R4 380 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 HS3ST4Q9Y661 456 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 ANAPC1Q9H1A4 1944 aa5.63□□□□□ -1.51
VPS41-211ENST00000466017 DENND4CQ5VZ89 1909 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 TCRBV7S2A1N4TA0A589 114 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 SLC12A8A0AV02 714 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 FAM170AA1A519 330 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 PI4K2BG5E9Z4 385 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 EEF2KO00418 725 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 DYNC1I1O14576 645 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 MCF2LO15068 1137 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 MTSS1O43312 755 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 COCHO43405 550 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 STC2O76061 302 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 TBX18O95935 607 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 PRKCAP17252 672 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ERCC2P18074 760 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 HDCP19113 662 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 GABRR2P28476 465 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 DNAJA1P31689 397 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 SERPINB6P35237 376 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 SLC11A2P49281 568 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 HARS2P49590 506 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 DNA2P51530 1060 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 NDST2P52849 883 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 VCPP55072 806 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 YBEYP58557 167 aaPredicted RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 CHRNEQ04844 493 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ADCY2Q08462 1091 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 C2orf54Q08AI8 447 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 EFEMP1Q12805 493 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 IFRD2Q12894 506 aaPredicted RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 ADAM15Q13444 863 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 BRD3Q15059 726 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 PDK1Q15118 436 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 SF1Q15637 639 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 SLC14A2Q15849 920 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ERCC6LQ2NKX8 1250 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 SMTNL2Q2TAL5 461 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 MS4A13Q5J8X5 152 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 C10orf120Q5SQS8 335 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 MPP7Q5T2T1 576 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ZFYVE27Q5T4F4 411 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ADGRF1Q5T601 910 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 AFMIDQ63HM1 303 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 DUPD1Q68J44 220 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 NCBP2-AS2Q69YL0 99 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 LRRC31Q6UY01 552 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 CCNI2Q6ZMN8 369 aaPredicted RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 RFX8Q6ZV50 586 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 NLRP14Q86W24 1093 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 DDX42Q86XP3 938 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS41-211ENST00000466017 RFX6Q8HWS3 928 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 IFT20Q8IY31 132 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 UMODL1-AS1Q8N2C9 162 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 CPXM2Q8N436 756 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 CELF2-AS1Q8N7Q2 184 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 CCDC89Q8N998 374 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 NOA1Q8NC60 698 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 BBOF1Q8ND07 529 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 VN1R2Q8NFZ6 395 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 OR6P1Q8NGX9 317 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ACTL9Q8TC94 416 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 ARNTL2Q8WYA1 636 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 HSPH1Q92598 858 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 P3H4Q92791 437 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ZNF707Q96C28 371 aaPredicted RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 HAUS1Q96CS2 278 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 OTUB2Q96DC9 234 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 OLFM3Q96PB7 478 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 GCNAQ96QF7 691 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 KRT12Q99456 494 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ERP44Q9BS26 406 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 HEMGNQ9BXL5 484 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 AP1M1Q9BXS5 423 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 CALN1Q9BXU9 219 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 SLC46A2Q9BY10 475 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 RAB17Q9H0T7 212 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 EPB41L4BQ9H329 900 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ANKZF1Q9H8Y5 726 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 MAN1C1Q9NR34 630 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ASAH2Q9NR71 780 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ARHGEF4Q9NR80 690 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 FAM114A2Q9NRY5 505 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 TMEM248Q9NWD8 314 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 OBP2AQ9NY56 170 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 DNMT3BQ9UBC3 853 aaKnown RBP5.62□□□□□ -1.51
VPS41-211ENST00000466017 TNFRSF10DQ9UBN6 386 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 ARHGAP26Q9UNA1 814 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 GBF1Q92538 1859 aa5.62□□□□□ -1.51
VPS41-211ENST00000466017 TRAV19A0A0A6YYK7 116 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CCDC195A0A1B0GUA6 201 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 E2F8A0AVK6 867 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CCDC151A5D8V7 595 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 C5orf60A6NFR6 353 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 E9PAM4 449 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 FAM72CH0Y354 149 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms