RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 CTAGE6Q86UF2 777 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 CIR1Q86X95 450 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 CTAGE4Q8IX94 777 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 RCOR2Q8IZ40 523 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 LGI2Q8N0V4 545 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 HDDC3Q8N4P3 179 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATG3-203ENST00000465980 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 TEKT4Q8WW24 435 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ZNF419Q96HQ0 510 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 RBM41Q96IZ5 413 aaKnown RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 RAB6CQ9H0N0 254 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 FAM204AQ9H8W3 233 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ZWILCHQ9H900 591 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ITM2CQ9NQX7 267 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 TMEM51Q9NW97 253 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 WSB2Q9NYS7 404 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 PCSK1NQ9UHG2 260 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 APC2O95996 2303 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 SERTM1A2A2V5 107 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 M0R082 166 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 KRT37O76014 449 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 IGLV3-25P01717 112 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 KRT1P04264 644 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 ATP5BP06576 529 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 SYPP08247 313 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 DLDP09622 509 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 CEACAM1P13688 526 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 GNSP15586 552 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 CSRP1P21291 193 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 TACR2P21452 398 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 OXTRP30559 389 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 RDXP35241 583 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 CETN2P41208 172 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 AIF1P55008 147 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 DEUP1Q05D60 604 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 GRIK2Q13002 908 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 ST3GAL2Q16842 350 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 FSCBQ5H9T9 825 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 MS4A13Q5J8X5 152 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 SCYL2Q6P3W7 929 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 KIAA0907Q7Z7F0 614 aaPredicted RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 CCDC117Q8IWD4 279 aaPredicted RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 ZNF417Q8TAU3 575 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 GANCQ8TET4 914 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 RNF34Q969K3 372 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 SLC39A13Q96H72 371 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 PSMG3-AS1Q96PY0 264 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 PEBP4Q96S96 227 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 ZNF587Q96SQ5 575 aaPredicted RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 NAP1L3Q99457 506 aaPredicted RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 DDX50Q9BQ39 737 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 TMEM245Q9H330 911 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 SLC32A1Q9H598 525 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 PRSS16Q9NQE7 514 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 DDIT4Q9NX09 232 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 SMARCAL1Q9NZC9 954 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
ATG3-203ENST00000465980 EIF2B4Q9UI10 523 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 INTS6Q9UL03 887 aaKnown RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 ARID1BQ8NFD5 2236 aaPredicted RBP9.62□□□□□ -0.87
ATG3-203ENST00000465980 A0A1B0GTW7 788 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 LRRD1A4D1F6 860 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 C3orf70A6NLC5 250 aaPredicted RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 EFCAB8A8MWE9 144 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 H0Y626 953 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 FGGP02679 453 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 KDELR1P24390 212 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 ACSL1P33121 698 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 PTPN7P35236 360 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 CXCR3P49682 368 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 STK19P49842 368 aaPredicted RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 ARSEP51690 589 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 TERF1P54274 439 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 ST8SIA6P61647 398 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 RPS14P62263 151 aaKnown RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 TUBB4BP68371 445 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 FAM193AP78312 1265 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 SIM1P81133 766 aaPredicted RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 SHC2P98077 582 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 SFSWAPQ12872 951 aaKnown RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 SEMA3BQ13214 749 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 EIF4EBP2Q13542 120 aaPredicted RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 PDK2Q15119 407 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 PPP2R5EQ16537 467 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 TAZQ16635 292 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 LONRF2Q1L5Z9 754 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 ODF2Q5BJF6 829 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 PITRM1Q5JRX3 1037 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 KCNT1Q5JUK3 1230 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 MPP7Q5T2T1 576 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 ZFYVE27Q5T4F4 411 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 ERMARDQ5T6L9 678 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 ZNF776Q68DI1 518 aaPredicted RBP9.61□□□□□ -0.87
ATG3-203ENST00000465980 AADACL2Q6P093 401 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 SPOCD1Q6ZMY3 1216 aa9.61□□□□□ -0.87
ATG3-203ENST00000465980 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATG3-203ENST00000465980 PIP4P1Q86T03 277 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms