RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ACVRL1P37023 503 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 SCNN1AP37088 669 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
CNOT4-208ENST00000465721 YPEL5P62699 121 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 EIF3IQ13347 325 aaKnown RBP11.94□□□□□ -0.5
CNOT4-208ENST00000465721 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 LRRC73Q5JTD7 316 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 ACBD5Q5T8D3 534 aaPredicted RBP11.94□□□□□ -0.5
CNOT4-208ENST00000465721 XKR5Q6UX68 686 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 SLC47A2Q86VL8 602 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 ZDHHC17Q8IUH5 632 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 DRC7Q8IY82 874 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 FBXO39Q8N4B4 442 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 GFM1Q96RP9 751 aaKnown RBP11.94□□□□□ -0.5
CNOT4-208ENST00000465721 FOXP3Q9BZS1 431 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 SLC13A1Q9BZW2 595 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 ZYG11BQ9C0D3 744 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 SYNCQ9H7C4 482 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 PLCB1Q9NQ66 1216 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 MBNL1Q9NR56 388 aaKnown RBP11.94□□□□□ -0.5
CNOT4-208ENST00000465721 NEU3Q9UQ49 428 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 PAXBP1Q9Y5B6 917 aa11.94□□□□□ -0.5
CNOT4-208ENST00000465721 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
CNOT4-208ENST00000465721 NEMP1O14524 444 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 GJB6O95452 261 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 GSRP00390 522 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 F9P00740 461 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 RPLP0P05388 317 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 UGT2B4P06133 528 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 FAM87AP0C7U9 286 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 PNMA6AP0CW24 399 aaPredicted RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 LIPCP11150 499 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 CCKBRP32239 447 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 CDH5P33151 784 aaPredicted RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 EIF4A3P38919 411 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 INHBCP55103 352 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 SNX16P57768 344 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 PPARDQ03181 441 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 PAK1Q13153 545 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 MORC3Q14149 939 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 IRF4Q15306 451 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 FAXCQ5TGI0 409 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 MANEALQ5VSG8 457 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 ESRP1Q6NXG1 681 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 USP53Q70EK8 1073 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 JAMLQ86YT9 394 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 ELOA2Q8IYF1 753 aaPredicted RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 SDR16C5Q8N3Y7 309 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 OR2AP1Q8NGE2 309 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 ARHGEF2Q92974 986 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 ARHGEF26Q96DR7 871 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 HAPLN3Q96S86 360 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 EPAS1Q99814 870 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 CPEB1Q9BZB8 566 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 SIX2Q9NPC8 291 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 NDFIP2Q9NV92 336 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 PPARGC1AQ9UBK2 798 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
CNOT4-208ENST00000465721 PCDHGA4Q9Y5G9 962 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 NOTCH2Q04721 2471 aa11.93□□□□□ -0.5
CNOT4-208ENST00000465721 GTPBP10A4D1E9 387 aaKnown RBP11.92□□□□□ -0.5
CNOT4-208ENST00000465721 KRIT1O00522 736 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 TOR1BO14657 336 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 NVLO15381 856 aaKnown RBP11.92□□□□□ -0.5
CNOT4-208ENST00000465721 SUV39H1O43463 412 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 MMP20O60882 483 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 TM7SF2O76062 418 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 WT1P19544 449 aaPredicted RBP11.92□□□□□ -0.5
CNOT4-208ENST00000465721 PON1P27169 355 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 CLCN1P35523 988 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 KRT9P35527 623 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 GABRB2P47870 512 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 HK3P52790 923 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 CCL7P80098 99 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 PTK2Q05397 1052 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 TCEA2Q15560 299 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 ALG11Q2TAA5 492 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 ATXN7L2Q5T6C5 722 aaPredicted RBP11.92□□□□□ -0.5
CNOT4-208ENST00000465721 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 GBP6Q6ZN66 633 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 ATG14Q6ZNE5 492 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 VASH2Q86V25 355 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 NLRP14Q86W24 1093 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 FAM131BQ86XD5 332 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 XYLT1Q86Y38 959 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 RYBPQ8N488 228 aaPredicted RBP11.92□□□□□ -0.5
CNOT4-208ENST00000465721 KLHL32Q96NJ5 620 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 OSBPL1AQ9BXW6 950 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 STRADBQ9C0K7 418 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 GULP1Q9UBP9 304 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 PISDQ9UG56 409 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 LOXL2Q9Y4K0 774 aa11.92□□□□□ -0.5
CNOT4-208ENST00000465721 ICE1Q9Y2F5 2266 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms