RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SERGEFQ9UGK8 458 aa17.13■□□□□ 0.33
USP39-211ENST00000465282 PCDHGA5Q9Y5G8 931 aa17.13■□□□□ 0.33
USP39-211ENST00000465282 WDR87Q6ZQQ6 2873 aa17.13■□□□□ 0.33
USP39-211ENST00000465282 CES2O00748 559 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 STK10O94804 968 aaKnown RBP17.12■□□□□ 0.33
USP39-211ENST00000465282 SERPINF2P08697 491 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 ADRB3P13945 408 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 CA4P22748 312 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 NFKBIAP25963 317 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 HOXD12P35452 270 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 NUDT1P36639 197 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 CCR5P51681 352 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 METAP1P53582 386 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 MAXP61244 160 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 ITKQ08881 620 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 SLC14A2Q15849 920 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 POM121L1PQ3SYA9 428 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 PARS2Q7L3T8 475 aaKnown RBP17.12■□□□□ 0.33
USP39-211ENST00000465282 CNTD1Q8N815 330 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 HOMER3Q9NSC5 361 aa17.12■□□□□ 0.33
USP39-211ENST00000465282 DMDP11532 3685 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 METTL12A8MUP2 240 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 ENC1O14682 589 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 HTRA2O43464 458 aaPredicted RBP17.11■□□□□ 0.33
USP39-211ENST00000465282 HLA-DQB2P05538 268 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 RETP07949 1114 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 PTPN3P26045 913 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 GNG11P61952 73 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 WASHC5Q12768 1159 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 ZBTB17Q13105 803 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 WDR45BQ5MNZ6 344 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 DARS2Q6PI48 645 aaKnown RBP17.11■□□□□ 0.33
USP39-211ENST00000465282 TTC7BQ86TV6 843 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 TMEFF1Q8IYR6 380 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 SLC35B2Q8TB61 432 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 LRRN4Q8WUT4 740 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 DNASE2BQ8WZ79 361 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 NAP1L3Q99457 506 aaPredicted RBP17.11■□□□□ 0.33
USP39-211ENST00000465282 SLC25A51Q9H1U9 297 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 SEPT10Q9P0V9 454 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 TTC7AQ9ULT0 858 aaPredicted RBP17.11■□□□□ 0.33
USP39-211ENST00000465282 TRPM6Q9BX84 2022 aa17.11■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 RNF103O00237 685 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TRAFD1O14545 582 aaPredicted RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 TSPAN6O43657 245 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 CEP104O60308 925 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 LRP3O75074 770 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 EPN2O95208 641 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 PIGNO95427 931 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 PRLRP16471 622 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 XPAP23025 273 aaPredicted RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 DHPSP49366 369 aaPredicted RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 TAS2R38P59533 333 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 ELP6Q0PNE2 266 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 UGP2Q16851 508 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 KIAA0895LQ68EN5 471 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 RABEPKQ7Z6M1 372 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TRIM69Q86WT6 500 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 NDUFAF2Q8N183 169 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 ARRDC2Q8TBH0 407 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 IMP4Q96G21 291 aaKnown RBP17.1■□□□□ 0.33
USP39-211ENST00000465282 AGAP3Q96P47 875 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 PPP1R2P1Q96PQ5 205 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 GMEB2Q9UKD1 530 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 SNX12Q9UMY4 172 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TTLL3Q9Y4R7 772 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 SDK1Q7Z5N4 2213 aa17.1■□□□□ 0.33
USP39-211ENST00000465282 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 UPK3BL1B0FP48 263 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 UPK3BL2E5RIL1 263 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 PLK4O00444 970 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 AREL1O15033 823 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 FGGP02679 453 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 TIMP2P16035 220 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 TCP1P17987 556 aaKnown RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 RBL1P28749 1068 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 STIP1P31948 543 aaKnown RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 CXCR5P32302 372 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 RPL26P61254 145 aaKnown RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 CCNG2Q16589 344 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 KIAA1161Q6NSJ0 714 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 DRICH1Q6PGQ1 229 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms