RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RGRP47804 291 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 MAXP61244 160 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 FNDC3BQ53EP0 1204 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 C2orf27AQ580R0 203 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 BBS5Q8N3I7 341 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ZNF513Q8N8E2 541 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 NAT8LQ8N9F0 302 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 KCNV2Q8TDN2 545 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 MGME1Q9BQP7 344 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 TNKS2Q9H2K2 1166 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 LRRC4CQ9HCJ2 640 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 MRPS17Q9Y2R5 130 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 TTLL3Q9Y4R7 772 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ATG2BQ96BY7 2078 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 KANSL1LA0AUZ9 987 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 CHRNB1P11230 501 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 HLA-EP13747 358 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 TARSP26639 723 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 ATP5DP30049 168 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 HPDP32754 393 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 IL12RB1P42701 662 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 RHOAP61586 193 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 NSUN2Q08J23 767 aaKnown RBP eCLIP17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 ENPP2Q13822 863 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 ZSCAN26Q16670 478 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 FBXO43Q4G163 708 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 UBAP2Q5T6F2 1119 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 C22orf39Q6P5X5 142 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 SERPINA13PQ6UXR4 307 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 CENPUQ71F23 418 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 PCDH20Q8N6Y1 951 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 ZNF366Q8N895 744 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 CPT1BQ92523 772 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 EXOC2Q96KP1 924 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 TM6SF2Q9BZW4 377 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 MTG2Q9H4K7 406 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 PPCSQ9HAB8 311 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 GLOD4Q9HC38 313 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 LTB4R2Q9NPC1 389 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 CACNA2D2Q9NY47 1150 aa17.13■□□□□ 0.33
EXOSC3-203ENST00000465229 TLDC2A0PJX2 215 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 TTC24A2A3L6 582 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 NPC1O15118 1278 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 GJB3O75712 270 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 METTL18O95568 372 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 CR2P20023 1033 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 ITKQ08881 620 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 NIPAL4Q0D2K0 466 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 FZD5Q13467 585 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 HNRNPA1L2Q32P51 320 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 ATXN7L2Q5T6C5 722 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 ALG1LQ6GMV1 187 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 ARHGEF18Q6ZSZ5 1173 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 Q6ZVU0 165 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 CHPFQ8IZ52 775 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 IL17RCQ8NAC3 791 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 ARRDC2Q8TBH0 407 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 EPS8L3Q8TE67 593 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 PTPRN2Q92932 1015 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 PWWP2AQ96N64 755 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 NELL2Q99435 816 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 FOXQ1Q9C009 403 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 SAYSD1Q9NPB0 183 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 PAK5Q9P286 719 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 LGALS13Q9UHV8 139 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 SLC8A2Q9UPR5 921 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 STON1Q9Y6Q2 735 aa17.12■□□□□ 0.33
EXOSC3-203ENST00000465229 A0A087WUV0 522 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 ERICH4A6NGS2 130 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 FAM170BA6NMN3 283 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 E7ESA3 106 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 TSHRP16473 764 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 NFKB1P19838 968 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 PRKCHP24723 683 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 LSP1P33241 339 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 WASP42768 502 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 ARL4CP56559 192 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 MRPS21P82921 87 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 DSC2Q02487 901 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 IHHQ14623 411 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 UBXN2BQ14CS0 331 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 E2F5Q15329 346 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 HIF1AQ16665 826 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 PARP6Q2NL67 630 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 TAOK1Q7L7X3 1001 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 PLPP6Q8IY26 295 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 TAB3Q8N5C8 712 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 OR2AP1Q8NGE2 309 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 OR2A12Q8NGT7 310 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 EDAQ92838 391 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 NSMCE3Q96MG7 304 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 FRMD8Q9BZ67 464 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 SLC25A51Q9H1U9 297 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms