RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 MARK4Q96L34 752 aa18.88■□□□□ 0.61
TSPAN4-210ENST00000464987 CRISPLD1Q9H336 500 aa18.88■□□□□ 0.61
TSPAN4-210ENST00000464987 MID2Q9UJV3 735 aa18.88■□□□□ 0.61
TSPAN4-210ENST00000464987 SSX2IPQ9Y2D8 614 aa18.88■□□□□ 0.61
TSPAN4-210ENST00000464987 ARHGEF37A1IGU5 675 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 LUC7L3O95232 432 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 CST5P28325 142 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 TM4SF4P48230 202 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 ACLYP53396 1101 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 CSHL1Q14406 222 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 FBXL22Q6P050 247 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 RPS27LQ71UM5 84 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 RNF135Q8IUD6 432 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 DCP1BQ8IZD4 617 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 PGBD5Q8N414 524 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 CCNYL1Q8N7R7 359 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 HIPK4Q8NE63 616 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 OR13J1Q8NGT2 312 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 MICAL1Q8TDZ2 1067 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 PTCD2Q8WV60 388 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 UBE2OQ9C0C9 1292 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 ZYG11BQ9C0D3 744 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 TET1Q8NFU7 2136 aa18.87■□□□□ 0.61
TSPAN4-210ENST00000464987 CCNT2O60583 730 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 PAX3P23760 479 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 ETFBP38117 255 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 BTKQ06187 659 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 CCNIQ14094 377 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 HNRNPDQ14103 355 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 PDCD2Q16342 344 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 RASIP1Q5U651 963 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 SH3RF2Q8TEC5 729 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 ATP13A1Q9HD20 1204 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 OR51F1A6NGY5 319 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 TADA2AO75478 443 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 EOMESO95936 686 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 COL6A2P12110 1019 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 CPB1P15086 417 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 ARSAP15289 507 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 RHOQP17081 205 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 PAMP19021 973 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 KCNA5P22460 613 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 GATMP50440 423 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 AP2B1P63010 937 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 NSUN2Q08J23 767 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 TBL3Q12788 808 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 FSCBQ5H9T9 825 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 MARC1Q5VT66 337 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 EP400NLQ6ZTU2 488 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 PTAR1Q7Z6K3 402 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 C8orf48Q96LL4 319 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 GPR62Q9BZJ7 368 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 FBXO44Q9H4M3 255 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 IGSF5Q9NSI5 407 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 TMEM248Q9NWD8 314 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 ANGPTL2Q9UKU9 493 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 KCTD3Q9Y597 815 aa18.86■□□□□ 0.61
TSPAN4-210ENST00000464987 PIK3R1P27986 724 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 SERPINH1P50454 418 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 RENBPP51606 427 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 ARSDP51689 593 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 PRKAA1Q13131 559 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 CTXN3Q4LDR2 81 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 FAM171A1Q5VUB5 890 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 FUBP3Q96I24 572 aaKnown RBP eCLIP18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 CATSPER2Q96P56 530 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 SP110Q9HB58 689 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 ARNT2Q9HBZ2 717 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 POMPQ9Y244 141 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 PCDHB5Q9Y5E4 795 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 TMEM189-UBE2V1I3L0A0 370 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 AIM2O14862 343 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 HNRNPLP14866 589 aaKnown RBP eCLIP18.85■□□□□ 0.615e-7■□□□□ 11.2
TSPAN4-210ENST00000464987 NDST2P52849 883 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 SATB1Q01826 763 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 NFE2Q16621 373 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 TMCO4Q5TGY1 634 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 METTL21CQ5VZV1 264 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 RSPO2Q6UXX9 243 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 MRPL46Q9H2W6 279 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 POMKQ9H5K3 350 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 SUDS3Q9H7L9 328 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 GPAMQ9HCL2 828 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 CYP4F12Q9HCS2 524 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 S100A14Q9HCY8 104 aa18.85■□□□□ 0.61
TSPAN4-210ENST00000464987 HEATR9A2RTY3 570 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 MAP3K7O43318 606 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 CRABP2P29373 138 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 ACVRL1P37023 503 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 TAF10Q12962 218 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 PTPRCAPQ14761 206 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 NXNQ6DKJ4 435 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 SNX32Q86XE0 403 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 LRRC49Q8IUZ0 686 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 LMNTD2Q8IXW0 634 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 KDM1BQ8NB78 822 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 PPFIBP2Q8ND30 876 aa18.84■□□□□ 0.61
TSPAN4-210ENST00000464987 SLC26A7Q8TE54 656 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms