RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PARD6AQ9NPB6 346 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 SCUBE2Q9NQ36 999 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 SEMA4GQ9NTN9 838 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 HAUS2Q9NVX0 235 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 RBM22Q9NW64 420 aaKnown RBP eCLIP14.68□□□□□ -0.062e-7■■■□□ 15.8
SQSTM1-205ENST00000464493 DKK3Q9UBP4 350 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 AMACRQ9UHK6 382 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 EIF2B4Q9UI10 523 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 ATXN2Q99700 1313 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 KCNK1O00180 336 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 GJB3O75712 270 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 NEBLO76041 1014 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 TJP3O95049 919 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 JCHAINP01591 159 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 GNSP15586 552 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 PECAM1P16284 738 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 CR2P20023 1033 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 SERPINA4P29622 427 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 CCR5P51681 352 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 BCL2L1Q07817 233 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 RALGPS1Q5JS13 557 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 CFAP58Q5T655 872 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 CCDC181Q5TID7 509 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 PEAR1Q5VY43 1037 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 AADACL2Q6P093 401 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 NEK5Q6P3R8 708 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 CEP76Q8TAP6 659 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 TFB1MQ8WVM0 346 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 HERPUD2Q9BSE4 406 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 MIR1-1HGQ9H1L0 117 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 SMOC1Q9H4F8 434 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 NOD2Q9HC29 1040 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 TPX2Q9ULW0 747 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 GVINP1Q7Z2Y8 2422 aa14.67□□□□□ -0.06
SQSTM1-205ENST00000464493 ANKRD36A6QL64 1941 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 PI4KAP42356 2102 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 C10orf142B7Z368 130 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 APOC4-APOC2K7ER74 178 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 KHNYNO15037 678 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 ZSCAN12O43309 604 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 AP1G1O43747 822 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 RNGTTO60942 597 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 PCDH8O95206 1070 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 APOC2P02655 101 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 TIMP2P16035 220 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 CES1P23141 567 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 CD27P26842 260 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 PPP2CBP62714 309 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 PPP2CAP67775 309 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 IFI35P80217 286 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 CCDC173Q0VFZ6 552 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 ZNF211Q13398 564 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 RPS6KA1Q15418 735 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 DUOXA1Q1HG43 343 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 MEI1Q5TIA1 1274 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 BRAT1Q6PJG6 821 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 RABEPKQ7Z6M1 372 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 PRPF39Q86UA1 669 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 TRIM69Q86WT6 500 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 TRIM58Q8NG06 486 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 HAUS1Q96CS2 278 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 FEM1CQ96JP0 617 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 NSMCE3Q96MG7 304 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 POLR1EQ9GZS1 481 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 SUSD2Q9UGT4 822 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 FADS3Q9Y5Q0 445 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 LAMA1P25391 3075 aa14.66□□□□□ -0.06
SQSTM1-205ENST00000464493 A0A1B0GTW7 788 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 A0A1W2PPC4 97 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 A0A1W2PQU0 124 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 TSPAN11A1L157 253 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 PATE3B3GLJ2 98 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 NEMP1O14524 444 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 BCAT2O15382 392 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 LATO43561 262 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 TSPAN6O43657 245 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 FOXD2O60548 495 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 HLA-DQB2P05538 268 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 XPAP23025 273 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 MAT2AP31153 395 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 ABL2P42684 1182 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 SUOXP51687 545 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 POLR2LP62875 67 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 PRKD1Q15139 912 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 SF3A2Q15428 464 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 UGP2Q16851 508 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 TRIM61Q5EBN2 209 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 ALG1LQ6GMV1 187 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 PRR23CQ6ZRP0 262 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 ZC3H18Q86VM9 953 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 HORMAD1Q86X24 394 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 REXO1L1PQ8IX06 675 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 KIAA2013Q8IYS2 634 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 ZCCHC9Q8N567 271 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 PAF1Q8N7H5 531 aa14.65□□□□□ -0.06
SQSTM1-205ENST00000464493 C1orf216Q8TAB5 229 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms