RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PDCD2Q16342 344 aaPredicted RBP4.34□□□□□ -1.71
ITGB1-208ENST00000464001 LRRC24Q50LG9 513 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 SPECC1Q5M775 1068 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.71
ITGB1-208ENST00000464001 RETSATQ6NUM9 610 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 DSTYKQ6XUX3 929 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 SYNE3Q6ZMZ3 975 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 OR8H2Q8N162 312 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 ATG16L2Q8NAA4 619 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 OTUD7AQ8TE49 926 aaPredicted RBP4.34□□□□□ -1.71
ITGB1-208ENST00000464001 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 ADGRG7Q96K78 797 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 PPM1MQ96MI6 270 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 TCF7L2Q9NQB0 619 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 GRHL1Q9NZI5 618 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 KCND3Q9UK17 655 aa4.34□□□□□ -1.71
ITGB1-208ENST00000464001 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 A0A0U1RQJ8 604 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 A0A1W2PRQ8 180 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 TARSL2A2RTX5 802 aaKnown RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 OR6C68A6NDL8 312 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 CHL1O00533 1208 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 SEPT4O43236 478 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 MBD4O95243 580 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 CBX6O95503 412 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 IGLV2-11P01706 119 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 ACP5P13686 325 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 HSD3B1P14060 373 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 CAPN3P20807 821 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 TCEA1P23193 301 aaKnown RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 PDIA3P30101 505 aaKnown RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 ADORA2A-AS1P86434 159 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 ZBED6P86452 979 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 PDE1CQ14123 709 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 RUNDC3AQ59EK9 446 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 WDR45BQ5MNZ6 344 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 TBC1D9BQ66K14 1250 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 RRAGAQ7L523 313 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 TBC1D1Q86TI0 1168 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 EXOC3L1Q86VI1 746 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 MUC20Q8N307 709 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 NAXEQ8NCW5 288 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 TBC1D22AQ8WUA7 517 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 ISCA1Q9BUE6 129 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 NPFFR1Q9GZQ6 430 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 BLOC1S4Q9NUP1 217 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 LRFN1Q9P244 771 aa4.33□□□□□ -1.72
ITGB1-208ENST00000464001 LRRFIP2Q9Y608 721 aaKnown RBP4.33□□□□□ -1.72
ITGB1-208ENST00000464001 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 DHX16O60231 1041 aaKnown RBP4.32□□□□□ -1.72
ITGB1-208ENST00000464001 IL1AP01583 271 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 CD4P01730 458 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 ARSAP15289 507 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 MPP1Q00013 466 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 ICA1Q05084 483 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 GALNT1Q10472 559 aaPredicted RBP4.32□□□□□ -1.72
ITGB1-208ENST00000464001 ST3GAL1Q11201 340 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 MYBPHQ13203 477 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 PDCLQ13371 301 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 SNTA1Q13424 505 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 DCAF6Q58WW2 860 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 INTS11Q5TA45 600 aaKnown RBP4.32□□□□□ -1.72
ITGB1-208ENST00000464001 SULT6B1Q6IMI4 303 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 ATOH1Q92858 354 aaPredicted RBP4.32□□□□□ -1.72
ITGB1-208ENST00000464001 TBC1D20Q96BZ9 403 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 TTC14Q96N46 770 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 RMDN3Q96TC7 470 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 PKP4Q99569 1192 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 DDX23Q9BUQ8 820 aaKnown RBP4.32□□□□□ -1.72
ITGB1-208ENST00000464001 GAREM1Q9H706 876 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 DACT1Q9NYF0 836 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 NFS1Q9Y697 457 aa4.32□□□□□ -1.72
ITGB1-208ENST00000464001 SAA2-SAA4A0A096LPE2 208 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 BICDL2A1A5D9 508 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 MAGEA13PA6NCF6 341 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 FAM157AC9JC47 383 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 BMPR1BO00238 502 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 NCAM2O15394 837 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 GFPT2O94808 682 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 METTL18O95568 372 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 RPN1P04843 607 aaKnown RBP4.31□□□□□ -1.72
ITGB1-208ENST00000464001 PTMAP06454 111 aaKnown RBP4.31□□□□□ -1.72
ITGB1-208ENST00000464001 UMODP07911 640 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 ADD2P35612 726 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 RPL3P39023 403 aaKnown RBP4.31□□□□□ -1.72
ITGB1-208ENST00000464001 PNPLA4P41247 253 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 ACSM2AQ08AH3 577 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 THOC5Q13769 683 aaKnown RBP4.31□□□□□ -1.72
ITGB1-208ENST00000464001 BYSLQ13895 437 aaKnown RBP4.31□□□□□ -1.72
ITGB1-208ENST00000464001 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 GPATCH4Q5T3I0 446 aaKnown RBP4.31□□□□□ -1.72
ITGB1-208ENST00000464001 CYP26C1Q6V0L0 522 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 RASGRP2Q7LDG7 609 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 ZSCAN30Q86W11 494 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 NCSTNQ92542 709 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 TRIM63Q969Q1 353 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 BICD1Q96G01 975 aa4.31□□□□□ -1.72
ITGB1-208ENST00000464001 EPYCQ99645 322 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms