RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 INSM1Q01101 510 aaPredicted RBP19.08■□□□□ 0.64
SF3A1-205ENST00000463818 KLHL30Q0D2K2 578 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 NR1I3Q14994 352 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 IQCB1Q15051 598 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 TPRG1LQ5T0D9 272 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 E4F1Q66K89 784 aaPredicted RBP19.08■□□□□ 0.64
SF3A1-205ENST00000463818 CACTIN-AS1Q8N1I8 211 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 DENND6BQ8NEG7 585 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 CXorf40AQ8TE69 158 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 RFFLQ8WZ73 363 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 EXOC2Q96KP1 924 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 KCTD15Q96SI1 283 aaPredicted RBP19.08■□□□□ 0.64
SF3A1-205ENST00000463818 TRIM7Q9C029 511 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 SLC39A8Q9C0K1 460 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 NLGN3Q9NZ94 848 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 KLF15Q9UIH9 416 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 URB1O60287 2271 aaKnown RBP19.08■□□□□ 0.64
SF3A1-205ENST00000463818 FREM2Q5SZK8 3169 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 ZFYVE26Q68DK2 2539 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 EIF3CLB5ME19 914 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 K7ESM1 405 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 DAPK3O43293 454 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 PRAMEF11O60813 436 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 TM7SF2O76062 418 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 RNF8O76064 485 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 CKMT1AP12532 417 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 NME1P15531 152 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 MIPP30301 263 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 PAPOLAP51003 745 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 EIF2B5Q13144 721 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 COL28A1Q2UY09 1125 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 VPS36Q86VN1 386 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 PARGQ86W56 976 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 HCAR2Q8TDS4 363 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 APOLD1Q96LR9 279 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 PEBP4Q96S96 227 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 EIF3CQ99613 913 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 NCAPGQ9BPX3 1015 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 SNRNP25Q9BV90 132 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 DUSP23Q9BVJ7 150 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 EDEM3Q9BZQ6 932 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 SUV39H2Q9H5I1 410 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 PDFQ9HBH1 243 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 CNOT8Q9UFF9 292 aaKnown RBP19.07■□□□□ 0.64
SF3A1-205ENST00000463818 AK5Q9Y6K8 562 aa19.07■□□□□ 0.64
SF3A1-205ENST00000463818 ARHGAP42A6NI28 874 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 H3BM21 787 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 PIGNO95427 931 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 MT-CO3P00414 261 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 SERPINC1P01008 464 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 JUNDP17535 347 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 XPAP23025 273 aaPredicted RBP19.06■□□□□ 0.64
SF3A1-205ENST00000463818 KLHL40Q2TBA0 621 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 TMEM52BQ4KMG9 183 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 FAM181AQ8N9Y4 354 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 ZNF548Q8NEK5 533 aaPredicted RBP19.06■□□□□ 0.64
SF3A1-205ENST00000463818 FNIP1Q8TF40 1166 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 NXPE2Q96DL1 559 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 WRAP53Q9BUR4 548 aaKnown RBP19.06■□□□□ 0.64
SF3A1-205ENST00000463818 NRSN2Q9GZP1 204 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 MBNL1Q9NR56 388 aaKnown RBP19.06■□□□□ 0.64
SF3A1-205ENST00000463818 CLCA2Q9UQC9 943 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 CSNK1G3Q9Y6M4 447 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 TP53BP1Q12888 1972 aaPredicted RBP19.06■□□□□ 0.64
SF3A1-205ENST00000463818 CHD5Q8TDI0 1954 aa19.06■□□□□ 0.64
SF3A1-205ENST00000463818 DSPP15924 2871 aaKnown RBP19.06■□□□□ 0.64
SF3A1-205ENST00000463818 LY6G6EA0A0G2JKS1 128 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 PRPSAP2O60256 369 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 BUB1BO60566 1050 aaPredicted RBP19.05■□□□□ 0.64
SF3A1-205ENST00000463818 ERCC2P18074 760 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 DUSP3P51452 185 aaPredicted RBP19.05■□□□□ 0.64
SF3A1-205ENST00000463818 SUOXP51687 545 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 SEMG2Q02383 582 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 PTK2BQ14289 1009 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 GRM3Q14832 879 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 RTP5Q14D33 572 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 RFX8Q6ZV50 586 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 DCBLD1Q8N8Z6 715 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 LMX1AQ8TE12 382 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 ZNF653Q96CK0 615 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 FUCA2Q9BTY2 467 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 C1QTNF7Q9BXJ2 289 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 MYO1AQ9UBC5 1043 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 U3KQA8 63 aa19.05■□□□□ 0.64
SF3A1-205ENST00000463818 AQP9O43315 295 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 OPA1O60313 960 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 PALMO75781 387 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 IGFALSP35858 605 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 THOP1P52888 689 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 YPEL5P62699 121 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 ELP6Q0PNE2 266 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 UGP2Q16851 508 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 PPP6R3Q5H9R7 873 aaPredicted RBP19.04■□□□□ 0.64
SF3A1-205ENST00000463818 AFMIDQ63HM1 303 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 CYP4V2Q6ZWL3 525 aaPredicted RBP19.04■□□□□ 0.64
SF3A1-205ENST00000463818 SRLQ86TD4 932 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 CAMK1DQ8IU85 385 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 PSTKQ8IV42 348 aaKnown RBP19.04■□□□□ 0.64
SF3A1-205ENST00000463818 ARHGAP12Q8IWW6 846 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 TP53I13Q8NBR0 393 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms