RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PEBP4Q96S96 227 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 SNRNP25Q9BV90 132 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 ISCUQ9H1K1 167 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 USP29Q9HBJ7 922 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 UBA2Q9UBT2 640 aaPredicted RBP20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 GGT7Q9UJ14 662 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 ITM2BQ9Y287 266 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 SCINQ9Y6U3 715 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 EEF2KO00418 725 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 ATMINO43313 823 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 RNF8O76064 485 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 CKMT1AP12532 417 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 TIMP2P16035 220 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 CYP4F3Q08477 520 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 KLHL30Q0D2K2 578 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 ACAP1Q15027 740 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 CA9Q16790 459 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 TMEM52BQ4KMG9 183 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 HS1BP3Q53T59 392 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 HES3Q5TGS1 186 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 SYN2Q92777 582 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 DUSP23Q9BVJ7 150 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 NRSN2Q9GZP1 204 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 DHX35Q9H5Z1 703 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 SCUBE2Q9NQ36 999 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 GPATCH2LQ9NWQ4 482 aa20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 CNOT8Q9UFF9 292 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-205ENST00000463615 A0A1W2PQJ5 194 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 ARHGAP42A6NI28 874 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 LRCH4O75427 683 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 ALPPL2P10696 532 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 MIPP30301 263 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 PCK1P35558 622 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 PBX1P40424 430 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 YPEL5P62699 121 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 RFX8Q6ZV50 586 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 ARHGAP12Q8IWW6 846 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 TBATAQ96M53 351 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 ZNF641Q96N77 438 aaPredicted RBP20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 TUBGCP5Q96RT8 1024 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 KCTD15Q96SI1 283 aaPredicted RBP20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 TRIM7Q9C029 511 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 SLC39A8Q9C0K1 460 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 MRPL47Q9HD33 250 aaKnown RBP20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 DNAJC28Q9NX36 388 aa20.78■□□□□ 0.92
PDLIM4-205ENST00000463615 LAMA5O15230 3695 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 H3BM21 787 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 J3KR12 359 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 INSIG1O15503 277 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 PRPSAP2O60256 369 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 TM7SF2O76062 418 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 GP1BAP07359 652 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 ERCC2P18074 760 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 INSM1Q01101 510 aaPredicted RBP20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 ELP6Q0PNE2 266 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 TARDBPQ13148 414 aaKnown RBP eCLIP20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 PDE1CQ14123 709 aaPredicted RBP20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 RTP5Q14D33 572 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 AGERQ15109 404 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 KLHL40Q2TBA0 621 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 TPRG1LQ5T0D9 272 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 HGSNATQ68CP4 663 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 DCBLD1Q8N8Z6 715 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 ZNF548Q8NEK5 533 aaPredicted RBP20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 ZNF653Q96CK0 615 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 NXPE2Q96DL1 559 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 C1QTNF7Q9BXJ2 289 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 SUV39H2Q9H5I1 410 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 PCSK1NQ9UHG2 260 aa20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 BZW2Q9Y6E2 419 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 URB1O60287 2271 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-205ENST00000463615 LY6G6EA0A0G2JKS1 128 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 K7ESM1 405 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 SERPINC1P01008 464 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 IGFALSP35858 605 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 PAPOLAP51003 745 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 NSUN2Q08J23 767 aaKnown RBP eCLIP20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 EIF2B5Q13144 721 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 RFTN1Q14699 578 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 UGP2Q16851 508 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 BRAT1Q6PJG6 821 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 LZTR1Q8N653 840 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 TP53I13Q8NBR0 393 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 NETO2Q8NC67 525 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 CXorf40AQ8TE69 158 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 IQCDQ96DY2 449 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 APOLD1Q96LR9 279 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 KLF15Q9UIH9 416 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 LHX6Q9UPM6 363 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 RAXQ9Y2V3 346 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 U3KQA8 63 aa20.76■□□□□ 0.91
PDLIM4-205ENST00000463615 TDRD6O60522 2096 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 A0A087WV48 116 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CFAP69A5D8W1 941 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 TPP1O14773 563 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 MMP20O60882 483 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 DUSP3P51452 185 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 DAB2P98082 770 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 DPYSQ14117 519 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 PTK2BQ14289 1009 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms