RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C2orf78A6NCI8 922 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 ARNTLO00327 626 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 PSMD3O43242 534 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 CCDC22O60826 627 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 OLFM2O95897 454 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 PDGFBP01127 241 aaPredicted RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 IGLV3-25P01717 112 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 GLULP15104 373 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 TCF3P15923 654 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 CALB2P22676 271 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 PTPN3P26045 913 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 MGAT1P26572 445 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 AVPR2P30518 371 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 GP5P40197 560 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 BST1Q10588 318 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 NME3Q13232 169 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 EIF4EBP2Q13542 120 aaPredicted RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 GRM2Q14416 872 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 TBCCQ15814 346 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 GRTP1Q5TC63 336 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 ARMC3Q5W041 872 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 TMEM135Q86UB9 458 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 YAF2Q8IY57 180 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 KIAA1958Q8N8K9 716 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 ARL14EPQ8N8R7 260 aaPredicted RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 ARMC2Q8NEN0 867 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 AGAP11Q8TF27 550 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 THOC1Q96FV9 657 aaKnown RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 NSL1Q96IY1 281 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 SLC22A12Q96S37 553 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 CPNE1Q99829 537 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 TBC1D10AQ9BXI6 508 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 WWP1Q9H0M0 922 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 GBA3Q9H227 469 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 MMADHCQ9H3L0 296 aaPredicted RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 MFSD1Q9H3U5 465 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 LRRC40Q9H9A6 602 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 THG1LQ9NWX6 298 aaKnown RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 NOP53Q9NZM5 478 aaKnown RBP10.04□□□□□ -0.8
PTPRD-207ENST00000463477 DCTN4Q9UJW0 460 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 ARHGAP26Q9UNA1 814 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 SCML2Q9UQR0 700 aa10.04□□□□□ -0.8
PTPRD-207ENST00000463477 MIA3Q5JRA6 1907 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 DENND4CQ5VZ89 1909 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 A0A0G2JND7 137 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 CACNG3O60359 315 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 USP1O94782 785 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 ALDOAP04075 364 aaKnown RBP10.03□□□□□ -0.8
PTPRD-207ENST00000463477 NCAM1P13591 858 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 GARSP41250 739 aaKnown RBP10.03□□□□□ -0.8
PTPRD-207ENST00000463477 NPY2RP49146 381 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 TUBP50607 506 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 SLC7A9P82251 487 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 COG7P83436 770 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 TMPRSS15P98073 1019 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 OVGP1Q12889 678 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 BMPR2Q13873 1038 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 MLF2Q15773 248 aaPredicted RBP10.03□□□□□ -0.8
PTPRD-207ENST00000463477 IER5LQ5T953 404 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 MROH9Q5TGP6 573 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 GPRIN1Q7Z2K8 1008 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 PID1Q7Z2X4 250 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 CRLF3Q8IUI8 442 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 CCNYQ8ND76 341 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 CERS2Q96G23 380 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 TSGA13Q96PP4 275 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 FAM83CQ9BQN1 747 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 GORASP1Q9BQQ3 440 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 SMG9Q9H0W8 520 aaKnown RBP10.03□□□□□ -0.8
PTPRD-207ENST00000463477 FAM96AQ9H5X1 160 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 TRPC7Q9HCX4 862 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 TLR8Q9NR97 1041 aaKnown RBP10.03□□□□□ -0.8
PTPRD-207ENST00000463477 PCMTD2Q9NV79 361 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 THAP1Q9NVV9 213 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 DDIT4Q9NX09 232 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 SYBUQ9NX95 663 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 KLHL8Q9P2G9 620 aaPredicted RBP10.03□□□□□ -0.8
PTPRD-207ENST00000463477 CA14Q9ULX7 337 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 CCL26Q9Y258 94 aa10.03□□□□□ -0.8
PTPRD-207ENST00000463477 FAM237BA0A1B0GVD1 139 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 FAM72CH0Y354 149 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 I6L893 689 aaPredicted RBP10.02□□□□□ -0.8
PTPRD-207ENST00000463477 GSRP00390 522 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 LMNAP02545 664 aaKnown RBP10.02□□□□□ -0.8
PTPRD-207ENST00000463477 CKMP06732 381 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 ITGA2BP08514 1039 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 MYL2P10916 166 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 AOC1P19801 751 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 SERPINB3P29508 390 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 HOXC13P31276 330 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 HADHAP40939 763 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 NUBP1P53384 320 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 CHI3L2Q15782 390 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 BRMS1LQ5PSV4 323 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 HECTD3Q5T447 861 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 FAM72AQ5TYM5 149 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.8
PTPRD-207ENST00000463477 FAM72DQ6L9T8 149 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms