RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SNRNP25Q9BV90 132 aaKnown RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 DHX35Q9H5Z1 703 aaKnown RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 PDFQ9HBH1 243 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 CBX8Q9HC52 389 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 UBA2Q9UBT2 640 aaPredicted RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 ACTL7AQ9Y615 435 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 PLXNB3Q9ULL4 1909 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ASPMQ8IZT6 3477 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 TSPAN11A1L157 253 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 NEMP2A6NFY4 417 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 GOLGA6L19H0YKK7 550 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 NEMP1O14524 444 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 FPGTO14772 594 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 PRAMEF11O60813 436 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 LRCH4O75427 683 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 PIAS2O75928 621 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 KRT37O76014 449 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 CKMT2P17540 419 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ACP1P24666 158 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 MIPP30301 263 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 HNF1BP35680 557 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ABL2P42684 1182 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ACADVLP49748 655 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 UBASH3AP57075 661 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 HNRNPKP61978 463 aaKnown RBP eCLIP12.05□□□□□ -0.48
RTCB-202ENST00000463455 LSM11P83369 360 aaKnown RBP eCLIP12.05□□□□□ -0.48
RTCB-202ENST00000463455 ZBED6P86452 979 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ELP6Q0PNE2 266 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 BNIP3Q12983 259 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 PIGHQ14442 188 aaPredicted RBP12.05□□□□□ -0.48
RTCB-202ENST00000463455 BOLA3Q53S33 107 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 AFMIDQ63HM1 303 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 HGSNATQ68CP4 663 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 BRAT1Q6PJG6 821 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 PROSER1Q86XN7 944 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 EID2Q8N6I1 236 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ARFGAP1Q8N6T3 406 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 NIPA2Q8N8Q9 360 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 OR13H1Q8NG92 308 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 OR4C6Q8NH72 309 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 TBATAQ96M53 351 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ZNF641Q96N77 438 aaPredicted RBP12.05□□□□□ -0.48
RTCB-202ENST00000463455 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 DUSP23Q9BVJ7 150 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 CALN1Q9BXU9 219 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 ZWILCHQ9H900 591 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 LHX3Q9UBR4 397 aa12.05□□□□□ -0.48
RTCB-202ENST00000463455 APC2O95996 2303 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 SPTY2D1-AS1A0A0U1RR47 76 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 SRRM3A6NNA2 597 aaPredicted RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 H3BM21 787 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 DAPK3O43293 454 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 PAK4O96013 591 aaPredicted RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 CSF2P04141 144 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 SERPING1P05155 500 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 TPM3P06753 285 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 ALPPL2P10696 532 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 NME1P15531 152 aaKnown RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 DGKAP23743 735 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 PFN3P60673 137 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 FGL2Q14314 439 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 DPYSL2Q16555 572 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 TDRD12Q587J7 1177 aaKnown RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 ATXN7L2Q5T6C5 722 aaPredicted RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 Q6ZSR6 202 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 CYP4V2Q6ZWL3 525 aaPredicted RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 PTAR1Q7Z6K3 402 aaPredicted RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 LUZP1Q86V48 1076 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 PARGQ86W56 976 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 SLC22A18ASQ8N1D0 253 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 OR6K2Q8NGY2 324 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 RFFLQ8WZ73 363 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 KLK6Q92876 244 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 BMFQ96LC9 184 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 PEBP4Q96S96 227 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 KLC2Q9H0B6 622 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 CCDC86Q9H6F5 360 aaKnown RBP12.04□□□□□ -0.48
RTCB-202ENST00000463455 FZD3Q9NPG1 666 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 NLGN3Q9NZ94 848 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 NCKIPSDQ9NZQ3 722 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 CA5BQ9Y2D0 317 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 CSNK1G3Q9Y6M4 447 aa12.04□□□□□ -0.48
RTCB-202ENST00000463455 CFAP69A5D8W1 941 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 IGLON5A6NGN9 336 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 SPINT1O43278 529 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 TM7SF2O76062 418 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 ERCC2P18074 760 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 GKP32189 559 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 HSPA9P38646 679 aaKnown RBP12.03□□□□□ -0.48
RTCB-202ENST00000463455 ARL4AP40617 200 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 RENBPP51606 427 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms