RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 MRPL9Q9BYD2 267 aaKnown RBP12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 FRMD8P1Q9BZ68 369 aaPredicted RBP12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 C11orf49Q9H6J7 331 aa12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 PNPLA8Q9NP80 782 aa12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 PNPOQ9NVS9 261 aa12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 FAF1Q9UNN5 650 aaPredicted RBP12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 AK5Q9Y6K8 562 aa12.15□□□□□ -0.47
TNRC6A-204ENST00000462400 HOXA2O43364 376 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 DCXO43602 365 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 HSPA8P11142 646 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 GJA8P48165 433 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 IDH3AP50213 366 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 NR1H2P55055 460 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 TPI1P60174 286 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 NFE2Q16621 373 aaPredicted RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 CNKSR3Q6P9H4 555 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 OTOP2Q7RTS6 562 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 GALNT4Q8N4A0 578 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 NPWQ8N729 165 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 CCNYQ8ND76 341 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 FNDC8Q8TC99 324 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 DDI1Q8WTU0 396 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 LIN28AQ9H9Z2 209 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 MKS1Q9NXB0 559 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 THEGQ9P2T0 379 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 OR12D3Q9UGF7 316 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 PAIP2BQ9ULR5 123 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 CEPT1Q9Y6K0 416 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 SHROOM3Q8TF72 1996 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 A0A1B0GTW7 788 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 METTL18O95568 372 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 HMBSP08397 361 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 DNAJB2P25686 324 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 VARSP26640 1264 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 CXCR3P49682 368 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 MRPS22P82650 360 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 APOFQ13790 326 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 DPYSQ14117 519 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 PDK1Q15118 436 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 SLC44A4Q53GD3 710 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 ALDH16A1Q8IZ83 802 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 RIN3Q8TB24 985 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 CELF6Q96J87 481 aaKnown RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 ARHGAP26Q9UNA1 814 aa12.14□□□□□ -0.47
TNRC6A-204ENST00000462400 WDR27A2RRH5 827 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 HMX2A2RU54 273 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 LRIG2O94898 1065 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 OR1D2P34982 312 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 MPP3Q13368 585 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 CYTH1Q15438 398 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 MBLAC2Q68D91 279 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 DNAJC5GQ8N7S2 189 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 GFM2Q969S9 779 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 STN1Q9H668 368 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 PLAC1Q9HBJ0 212 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 ABCC13Q9NSE7 274 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 PIH1D1Q9NWS0 290 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 RANBP2P49792 3224 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 OR6C75A6NL08 312 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 KCNK1O00180 336 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 DCLK1O15075 740 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 IRAK2O43187 625 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 COX4I1P13073 169 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 FUT4P22083 530 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 PRKCHP24723 683 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 MSX2P35548 267 aaPredicted RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 CDKL1Q00532 357 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 EFEMP1Q12805 493 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 TAF10Q12962 218 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 SEMA3BQ13214 749 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 TRMT10BQ6PF06 316 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 BORAQ6PGQ7 559 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 ATG14Q6ZNE5 492 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 MIB1Q86YT6 1006 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 PPP4R1Q8TF05 950 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 FBXO32Q969P5 355 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 NTAN1Q96AB6 310 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 PGAP3Q96FM1 320 aaPredicted RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 FUBP3Q96I24 572 aaKnown RBP eCLIP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 RSL24D1Q9UHA3 163 aaKnown RBP12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
TNRC6A-204ENST00000462400 BCLAF3A2AJT9 711 aaKnown RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 CHADO15335 359 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ZNF189O75820 626 aaPredicted RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 GSRP00390 522 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 IGLV3-25P01717 112 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 APOEP02649 317 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 APRTP07741 180 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms