RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MFHAS1Q9Y4C4 1052 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 TDRD6O60522 2096 aaKnown RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 LRP4O75096 1905 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 ZFHX4Q86UP3 3567 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 TSPAN11A1L157 253 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 FAM221BA6H8Z2 402 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 TMEM8BA6NDV4 472 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 ENC1O14682 589 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 FPGTO14772 594 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 AREL1O15033 823 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 PAK4O96013 591 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-204ENST00000462258 XPAP23025 273 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-204ENST00000462258 HNRNPH3P31942 346 aaKnown RBP10.29□□□□□ -0.76
SF3A3-204ENST00000462258 RGRP47804 291 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 HCAR3P49019 387 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 IL10RBQ08334 325 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 BNIP3Q12983 259 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 GRM3Q14832 879 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 CCDC157Q569K6 752 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 TXNRD3NBQ6F5E7 133 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 TMCO3Q6UWJ1 677 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 ARHGAP36Q6ZRI8 547 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 KANSL1Q7Z3B3 1105 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 LZTR1Q8N653 840 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 RNF214Q8ND24 703 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 FAM174AQ8TBP5 190 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 ZNF564Q8TBZ8 553 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-204ENST00000462258 CXorf40AQ8TE69 158 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 TEKT4Q8WW24 435 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 DNAJC7Q99615 494 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 CPEB1Q9BZB8 566 aaKnown RBP10.29□□□□□ -0.76
SF3A3-204ENST00000462258 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 DKK3Q9UBP4 350 aa10.29□□□□□ -0.76
SF3A3-204ENST00000462258 FREM2Q5SZK8 3169 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ARID1BQ8NFD5 2236 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 POM121BA6NF01 834 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 MYO1FO00160 1098 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 RFPL3O75679 317 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 PALMO75781 387 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 LDOC1O95751 146 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 TPM1P09493 284 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 RARAP10276 462 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 SERPINA4P29622 427 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 SERPINB6P35237 376 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 IGFALSP35858 605 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 GJC1P36383 396 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 EIF4A3P38919 411 aaKnown RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 SSR1P43307 286 aaKnown RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 RABIFP47224 123 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ACADVLP49748 655 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ELP6Q0PNE2 266 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 DNAJC3Q13217 504 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 SGCGQ13326 291 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 KRT81Q14533 505 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ZNF235Q14590 738 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 RFTN1Q14699 578 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 SLC18A3Q16572 532 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 BOLA3Q53S33 107 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 TMCO4Q5TGY1 634 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 Q6ZSR6 202 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 POLNQ7Z5Q5 900 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 TTC7BQ86TV6 843 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 PARGQ86W56 976 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 VSTM4Q8IW00 320 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 TP53INP2Q8IXH6 220 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 TSEN2Q8NCE0 465 aaKnown RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ASB12Q8WXK4 309 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 CTNNBL1Q8WYA6 563 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ZCCHC14Q8WYQ9 949 aaKnown RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 BMFQ96LC9 184 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 LENG8Q96PV6 779 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 TUBGCP5Q96RT8 1024 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 KLF6Q99612 283 aaPredicted RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 WRAP53Q9BUR4 548 aaKnown RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 C1QTNF7Q9BXJ2 289 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 C1QTNF2Q9BXJ5 285 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 DEF6Q9H4E7 631 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ATP13A3Q9H7F0 1226 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 PCDH18Q9HCL0 1135 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ABHD10Q9NUJ1 306 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 ETNK2Q9NVF9 386 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 KLHL11Q9NVR0 708 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 DNAJC28Q9NX36 388 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 CTTNBP2NLQ9P2B4 639 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 IPO11Q9UI26 975 aaKnown RBP10.28□□□□□ -0.76
SF3A3-204ENST00000462258 HS3ST3A1Q9Y663 406 aa10.28□□□□□ -0.76
SF3A3-204ENST00000462258 MMP20O60882 483 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 MFAP3LO75121 409 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 PIAS2O75928 621 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 TM7SF2O76062 418 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 TIMP2P16035 220 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ITIH2P19823 946 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 AMPD1P23109 780 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 MMP12P39900 470 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 SUOXP51687 545 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 CDH6P55285 790 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 PDE1CQ14123 709 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms