RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SPASTQ9UBP0 616 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 CLCA2Q9UQC9 943 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 ACTL7AQ9Y615 435 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 PTPRBP23467 1997 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 COL5A1P20908 1838 aaPredicted RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 A0A1B0GTH6 734 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 A0A1W2PQ67 120 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 SCAMP1O15126 338 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 SIGLEC6O43699 453 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 MMP20O60882 483 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ZNF821O75541 412 aaPredicted RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 PIAS2O75928 621 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ANXA6P08133 673 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 SKILP12757 684 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ACP1P24666 158 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 MIPP30301 263 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 SERPINB6P35237 376 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ACADVLP49748 655 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 PAPOLAP51003 745 aaKnown RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 YPEL5P62699 121 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 PPARDQ03181 441 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 PIGHQ14442 188 aaPredicted RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 ZNF235Q14590 738 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 LRRC14Q15048 493 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TMEM259Q4ZIN3 620 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 BOLA3Q53S33 107 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TMCO4Q5TGY1 634 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ESRP1Q6NXG1 681 aaKnown RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 BRAT1Q6PJG6 821 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TMCO3Q6UWJ1 677 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 GCNT7Q6ZNI0 430 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 RFX8Q6ZV50 586 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ZNF571Q7Z3V5 609 aaPredicted RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 RNF214Q8ND24 703 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 OR4C6Q8NH72 309 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 HCAR2Q8TDS4 363 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 FNIP1Q8TF40 1166 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ASB12Q8WXK4 309 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 HSPH1Q92598 858 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 DEPDC7Q96QD5 511 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TUBGCP5Q96RT8 1024 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 WRAP53Q9BUR4 548 aaKnown RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 CPEB1Q9BZB8 566 aaKnown RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 RBSNQ9H1K0 784 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TSPY26PQ9H489 355 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 SUV39H2Q9H5I1 410 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 GPATCH2LQ9NWQ4 482 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TOR4AQ9NXH8 423 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 TAS2R14Q9NYV8 317 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 DKK3Q9UBP4 350 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ZNF212Q9UDV6 495 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 IP6K2Q9UHH9 426 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 LHX6Q9UPM6 363 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 ZFR2Q9UPR6 939 aaKnown RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 LUC7L2Q9Y383 392 aaKnown RBP8.97□□□□□ -0.97
LDB1-203ENST00000461873 MFHAS1Q9Y4C4 1052 aa8.97□□□□□ -0.97
LDB1-203ENST00000461873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.97□□□□□ -0.971e-8■■□□□ 11.7
LDB1-203ENST00000461873 SPTY2D1-AS1A0A0U1RR47 76 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.96□□□□□ -0.98
LDB1-203ENST00000461873 CPED1A4D0V7 1026 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 TMEM191CA6NGB0 347 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 MYO1FO00160 1098 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 AQP9O43315 295 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 CBFA2T2O43439 604 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 CSF2P04141 144 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SERPING1P05155 500 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ALPIP09923 528 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ERCC2P18074 760 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 KELP23276 732 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 PCK1P35558 622 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ACTN2P35609 894 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 PRKCIP41743 596 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SCNN1BP51168 640 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ZBED6P86452 979 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 FANCCQ00597 558 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SEMG2Q02383 582 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 IL10RBQ08334 325 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ITKQ08881 620 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 TARDBPQ13148 414 aaKnown RBP eCLIP8.96□□□□□ -0.98
LDB1-203ENST00000461873 BIRC2Q13490 618 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 GSE1Q14687 1217 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 NR1I3Q14994 352 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ELOCQ15369 112 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SHBQ15464 509 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 NR0B2Q15466 257 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 UGP2Q16851 508 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 FIGNQ5HY92 759 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 CCDC122Q5T0U0 273 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ZCCHC8Q6NZY4 707 aaKnown RBP8.96□□□□□ -0.98
LDB1-203ENST00000461873 KDM7AQ6ZMT4 941 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 APTXQ7Z2E3 356 aaKnown RBP8.96□□□□□ -0.98
LDB1-203ENST00000461873 RD3Q7Z3Z2 195 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 MAPK15Q8TD08 544 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 PDCD6IPQ8WUM4 868 aaKnown RBP8.96□□□□□ -0.98
LDB1-203ENST00000461873 FUCA2Q9BTY2 467 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SNRNP25Q9BV90 132 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms