RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 C1QTNF7Q9BXJ2 289 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 CD209Q9NNX6 404 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 TMEM45AQ9NWC5 275 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 SLC8A2Q9UPR5 921 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 PKP3Q9Y446 797 aa4.81□□□□□ -1.64
PRPF4B-202ENST00000461612 COL4A5P29400 1685 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 DICER1Q9UPY3 1922 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 TMEM247A6NEH6 219 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 NFATC1O95644 943 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 PKMP14618 531 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 PRPH2P23942 346 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 HOXD9P28356 352 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 HOXD10P28358 340 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 RPS6KA3P51812 740 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 PRMT2P55345 433 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 B4GALNT1Q00973 533 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 CHRNDQ07001 517 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 SRSF1Q07955 248 aaKnown RBP eCLIP4.8□□□□□ -1.643e-6■□□□□ 9.3
PRPF4B-202ENST00000461612 PDCLQ13371 301 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 BIRC3Q13489 604 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 THOC5Q13769 683 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 GCKRQ14397 625 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 SEMA3AQ14563 771 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 CCDC57Q2TAC2 916 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 TWISTNBQ3B726 338 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 TMEM95Q3KNT9 176 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 HSP90AB4PQ58FF6 505 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 KIAA1755Q5JYT7 1200 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 KIAA1324Q6UXG2 1013 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 RTL10Q7L3V2 364 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 MRPL10Q7Z7H8 261 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 CPXCR1Q8N123 301 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 IGFBPL1Q8WX77 278 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 ZBED3Q96IU2 234 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 ZFYVE19Q96K21 471 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 ADAD1Q96M93 576 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 PPP1R10Q96QC0 940 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 UBA5Q9GZZ9 404 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 TMEM184CQ9NVA4 438 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 LUZP4Q9P127 313 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 ZNF70Q9UC06 446 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 SLC25A13Q9UJS0 675 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 AGO2Q9UKV8 859 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 TRIM17Q9Y577 477 aa4.8□□□□□ -1.64
PRPF4B-202ENST00000461612 PDE4DIPQ5VU43 2346 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 ASTN2O75129 1339 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 IL16Q14005 1332 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 BCORQ6W2J9 1755 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 TRBV5-3A0A0A0MS03 114 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 KIR2DS5A0A0G2JLQ3 304 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 WDR91A4D1P6 747 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 NPIPB13A6NJU9 1138 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 NPIPB5A8MRT5 1133 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 NPIPB4C9JG80 1138 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 KIR2DS3K7RE56 304 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 FRAT2O75474 233 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 IGKV5-2P06315 115 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 CNPP09543 421 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 ACP5P13686 325 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 GSTM2P28161 218 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 RAPGEF1Q13905 1077 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 PGM5Q15124 567 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 ANKRD1Q15327 319 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 PLK5Q496M5 336 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 Q4G0T1 1027 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 MIDNQ504T8 468 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 CAVIN4Q5BKX8 364 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 TTC39AQ5SRH9 613 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 C11orf87Q6NUJ2 197 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 AADACL2Q6P093 401 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 MTFR2Q6P444 385 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 CYB5R4Q7L1T6 521 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 KLBQ86Z14 1044 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 WDR63Q8IWG1 891 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 SUGP1Q8IWZ8 645 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 SLC44A5Q8NCS7 719 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 FAM110DQ8TAY7 271 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 TBC1D22AQ8WUA7 517 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 DNAAF4Q8WXU2 420 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 TRIM31Q9BZY9 425 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 PRKRIP1Q9H875 184 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 VEZTQ9HBM0 779 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 ZCCHC17Q9NP64 241 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 C9orf78Q9NZ63 289 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 TMOD2Q9NZR1 351 aa4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 COL1A1P02452 1464 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-202ENST00000461612 SIPA1L3O60292 1781 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-202ENST00000461612 ARFGEF2Q9Y6D5 1785 aa4.78□□□□□ -1.64
PRPF4B-202ENST00000461612 MSI1O43347 362 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-202ENST00000461612 UGDHO60701 494 aa4.78□□□□□ -1.64
PRPF4B-202ENST00000461612 MOSPD3O75425 235 aa4.78□□□□□ -1.64
PRPF4B-202ENST00000461612 TOP3BO95985 862 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-202ENST00000461612 TMEM191BP0C7N4 346 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms