RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HID1Q8IV36 788 aa17.47■□□□□ 0.39
TOP3A-202ENST00000461127 PSMG3-AS1Q96PY0 264 aa17.47■□□□□ 0.39
TOP3A-202ENST00000461127 SPON2Q9BUD6 331 aa17.47■□□□□ 0.39
TOP3A-202ENST00000461127 B3GNT4Q9C0J1 378 aa17.47■□□□□ 0.39
TOP3A-202ENST00000461127 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
TOP3A-202ENST00000461127 FOXJ2Q9P0K8 574 aa17.47■□□□□ 0.39
TOP3A-202ENST00000461127 PNMA8BQ9ULN7 279 aaPredicted RBP17.47■□□□□ 0.39
TOP3A-202ENST00000461127 C16orf96A6NNT2 1141 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 STMND1H3BQB6 276 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 AGRPO00253 132 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 ZNF821O75541 412 aaPredicted RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 CELA2BP08218 269 aaPredicted RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 OR1E1P30953 314 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 IGFALSP35858 605 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 ETV5P41161 510 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 PPP1R2P41236 205 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 CCR10P46092 362 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 HK3P52790 923 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 ZFP36L1Q07352 338 aaKnown RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 PDCLQ13371 301 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 TFAP2DQ7Z6R9 452 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 RYBPQ8N488 228 aaPredicted RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 Q8N9G6 341 aaPredicted RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 SLC12A9Q9BXP2 914 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 EDEM3Q9BZQ6 932 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 HECAQ9UBI9 543 aaPredicted RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 ITM2BQ9Y287 266 aa17.46■□□□□ 0.39
TOP3A-202ENST00000461127 ZFC3H1O60293 1989 aaKnown RBP17.46■□□□□ 0.39
TOP3A-202ENST00000461127 TMEM110-MUSTN1A8MSY1 372 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 C9orf172C9J069 976 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.45■□□□□ 0.38
TOP3A-202ENST00000461127 GRAP2O75791 330 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 TM7SF2O76062 418 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 RASGRP1O95267 797 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 BMP6P22004 513 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ABL2P42684 1182 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 PEX5P50542 639 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ZNF805Q5CZA5 627 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 PHF19Q5T6S3 580 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ACBD5Q5T8D3 534 aaPredicted RBP17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ZNF783Q6ZMS7 281 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
TOP3A-202ENST00000461127 OR7D4Q8NG98 312 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ZNF606Q8WXB4 792 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 WDCPQ9H6R7 721 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ATP13A1Q9HD20 1204 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 GGT7Q9UJ14 662 aa17.45■□□□□ 0.38
TOP3A-202ENST00000461127 ILVBLA1L0T0 632 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 BLACEA4D250 179 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 P4HA2O15460 535 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 THAP12O43422 761 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 GLB1P16278 677 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 HTR1BP28222 390 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 PRCPP42785 496 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 LRRC63Q05C16 580 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 TCEA2Q15560 299 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 BRMS1LQ5PSV4 323 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 RD3Q7Z3Z2 195 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 PLPP6Q8IY26 295 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 ATL2Q8NHH9 583 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 CXorf40AQ8TE69 158 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 JPH3Q8WXH2 748 aaPredicted RBP17.44■□□□□ 0.38
TOP3A-202ENST00000461127 TSACCQ96A04 125 aaPredicted RBP17.44■□□□□ 0.38
TOP3A-202ENST00000461127 CATSPER2Q96P56 530 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 TM6SF2Q9BZW4 377 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 TKTL2Q9H0I9 626 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 MPP6Q9NZW5 540 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 APPL1Q9UKG1 709 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 CNTN6Q9UQ52 1028 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 FCF1Q9Y324 198 aaKnown RBP17.44■□□□□ 0.38
TOP3A-202ENST00000461127 RNF215Q9Y6U7 377 aa17.44■□□□□ 0.38
TOP3A-202ENST00000461127 DRGXA6NNA5 263 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ENO4A6NNW6 628 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 PSMA7O14818 248 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 PNLIPP16233 465 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 GNA15P30679 374 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ZNF165P49910 485 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 SNX16P57768 344 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ARHGEF7Q14155 803 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 CT47A1Q5JQC4 288 aaPredicted RBP17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ANKRD40Q6AI12 368 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ARHGEF19Q8IW93 802 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 IL22RA1Q8N6P7 574 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 LMO3Q8TAP4 145 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 GPBAR1Q8TDU6 330 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ISG20Q96AZ6 181 aaKnown RBP17.43■□□□□ 0.38
TOP3A-202ENST00000461127 EPAS1Q99814 870 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 OSBPL1AQ9BXW6 950 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 ARHGEF38Q9NXL2 777 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 RRN3Q9NYV6 651 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 CTNND2Q9UQB3 1225 aa17.43■□□□□ 0.38
TOP3A-202ENST00000461127 PPP1R3GB7ZBB8 358 aa17.42■□□□□ 0.38
TOP3A-202ENST00000461127 KRIT1O00522 736 aa17.42■□□□□ 0.38
TOP3A-202ENST00000461127 AREL1O15033 823 aa17.42■□□□□ 0.38
TOP3A-202ENST00000461127 DAB1O75553 588 aa17.42■□□□□ 0.38
TOP3A-202ENST00000461127 ZMPSTE24O75844 475 aa17.42■□□□□ 0.38
TOP3A-202ENST00000461127 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
TOP3A-202ENST00000461127 ERCC5P28715 1186 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 275 ms