RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-208	ENST00000461047	PTPRD	P23468	1912 aa		6.07	□□□□□ -1.44
NUP98-208	ENST00000461047	MYH10	P35580	1976 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	KANSL1L	A0AUZ9	987 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	HACD1	B0YJ81	288 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	PI4K2B	G5E9Z4	385 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	FAM72C	H0Y354	149 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	DFFA	O00273	331 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	MCF2L	O15068	1137 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	CST8	O60676	142 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	KAT7	O95251	611 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	SRPRA	P08240	638 aa	Known RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	PYGM	P11217	842 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	HOXD9	P28356	352 aa	Predicted RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	HOXC13	P31276	330 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ACTN2	P35609	894 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	CDKN2B	P42772	138 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	MAGEA9	P43362	315 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	RECQL	P46063	649 aa	Predicted RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	GALK1	P51570	392 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	RENBP	P51606	427 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ARSE	P51690	589 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	PLK1	P53350	603 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	DYNLT1	P63172	113 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	MRPS21	P82921	87 aa	Known RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ZXDA	P98168	799 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	LMNB2	Q03252	620 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	RAD51	Q06609	339 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ZNF33A	Q06730	810 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	SIGLEC14	Q08ET2	396 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	XRCC4	Q13426	336 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	PAFAH1B3	Q15102	231 aa	Known RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	CA9	Q16790	459 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	LONRF2	Q1L5Z9	754 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ACCSL	Q4AC99	568 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	HSF5	Q4G112	596 aa	Predicted RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ATP13A4	Q4VNC1	1196 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	RAB6C	Q53S08	254 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	FAM72A	Q5TYM5	149 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	MANEAL	Q5VSG8	457 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	DAB2IP	Q5VWQ8	1189 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	FAM72D	Q6L9T8	149 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	MFSD7	Q6UXD7	560 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	TPRG1	Q6ZUI0	275 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	FAM72B	Q86X60	149 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ATPAF2	Q8N5M1	289 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	RAPGEF5	Q92565	580 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	EDA	Q92838	391 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ZNF599	Q96NL3	588 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	FEM1A	Q9BSK4	669 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	IER2	Q9BTL4	223 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	HEMGN	Q9BXL5	484 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	TLR10	Q9BXR5	811 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	OSBPL6	Q9BZF3	934 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	CIPC	Q9C0C6	399 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	RAB6C	Q9H0N0	254 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	GOLPH3	Q9H4A6	298 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	SP110	Q9HB58	689 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ATP13A1	Q9HD20	1204 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ANLN	Q9NQW6	1124 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	ELOVL2	Q9NXB9	296 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	FBXO10	Q9UK96	956 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	TPX2	Q9ULW0	747 aa	Known RBP	6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	CA14	Q9ULX7	337 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	SNX12	Q9UMY4	172 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	HEY1	Q9Y5J3	304 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	SNX10	Q9Y5X0	201 aa		6.06	□□□□□ -1.44
NUP98-208	ENST00000461047	PATJ	Q8NI35	1801 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	hCG_1818297	A0A087WSY0	165 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047		A0A0U1RQJ8	604 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CFAP69	A5D8W1	941 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	USP27X	A6NNY8	438 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	RASA4B	C9J798	803 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047		H7C0C1	242 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	APOC4-APOC2	K7ER74	178 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CBX4	O00257	560 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	PGRMC1	O00264	195 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	ARNTL	O00327	626 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	GFRA2	O00451	464 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	DCLK1	O15075	740 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	RASA4	O43374	803 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	KDELR3	O43731	214 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	NARS	O43776	548 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	SYNCRIP	O60506	623 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	RNASEH1	O60930	286 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CNTN5	O94779	1100 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	APOC2	P02655	101 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	FGG	P02679	453 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	DLD	P09622	509 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CISD3	P0C7P0	127 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	TCF4	P15884	667 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CCNC	P24863	283 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	STIP1	P31948	543 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	HSPA9	P38646	679 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CD96	P40200	585 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	CSK	P41240	450 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	TNNT3	P45378	269 aa	Predicted RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	ATP5O	P48047	213 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	PAPOLA	P51003	745 aa	Known RBP	6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	STARD6	P59095	220 aa		6.05	□□□□□ -1.44
NUP98-208	ENST00000461047	ECT2L	Q008S8	904 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms