RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FAM111BQ6SJ93 734 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF720Q7Z2F6 126 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF410Q86VK4 478 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 HERC6Q8IVU3 1022 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 SYTL1Q8IYJ3 562 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 CEP57L1Q8IYX8 460 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 LILRA3Q8N6C8 439 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 CELF5Q8N6W0 485 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 PAF1Q8N7H5 531 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ANKRD53Q8N9V6 530 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 KIAA0895Q8NCT3 520 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MAGEC3Q8TD91 643 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 NOC3LQ8WTT2 800 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 SCFD1Q8WVM8 642 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 HERVK_113Q902F9 699 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 KIFAP3Q92845 792 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 SAAL1Q96ER3 474 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ZC3H10Q96K80 434 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MSLNLQ96KJ4 702 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 IFT74Q96LB3 600 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 EIF3CQ99613 913 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 TNMDQ9H2S6 317 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MRPL46Q9H2W6 279 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 FZD8Q9H461 694 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MRPL44Q9H9J2 332 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 PARVGQ9HBI0 331 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ANKFY1Q9P2R3 1169 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MAN1B1Q9UKM7 699 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MYO6Q9UM54 1294 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 TBX20Q9UMR3 447 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 PCDHB2Q9Y5E7 798 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 FNDC1Q4ZHG4 1894 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ZMYM2Q9UBW7 1377 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 KIAA1671Q9BY89 1806 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 TPRP12270 2363 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ZFHX2Q9C0A1 2572 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 A0A087WV62 115 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 FRMD3A2A2Y4 597 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 GOLGA6L10A6NI86 522 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 F2RL2O00254 374 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ACKR2O00590 384 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 APOL1O14791 398 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CHUKO15111 745 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CLIC2O15247 247 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ZSCAN9O15535 394 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ASAP2O43150 1006 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 AHCYL1O43865 530 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 RAMP2O60895 175 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 RTN2O75298 545 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ERLIN2O94905 339 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 POMCP01189 267 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 AHSGP02765 367 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CA3P07451 260 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 SFPQP23246 707 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 PCSK1P29120 753 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ADSSP30520 456 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 RFC2P35250 354 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 GRK6P43250 576 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ACOT2P49753 483 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 STX17P56962 302 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 UBE2HP62256 183 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 PRPF4BQ13523 1007 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 TFDP1Q14186 410 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 MXD4Q14582 209 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 SLMAPQ14BN4 828 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 POSTNQ15063 836 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 MAPK6Q16659 721 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC38Q502W7 563 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 GLRA4Q5JXX5 417 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 WLSQ5T9L3 541 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ATF7IP2Q5U623 682 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 KLHDC7AQ5VTJ3 777 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 LMBRD2Q68DH5 695 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 PSRC1Q6PGN9 363 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 LRRC55Q6ZSA7 311 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 UNC13DQ70J99 1090 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC80Q76M96 950 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 SPATA21Q7Z572 469 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ECHDC2Q86YB7 292 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 FAM90A1Q86YD7 464 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC50Q8IVM0 306 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 MFN1Q8IWA4 741 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ZBTB8OSQ8IWT0 167 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 THNSL1Q8IYQ7 743 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CASKIN2Q8WXE0 1202 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 JAKMIP2Q96AA8 810 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 BICD1Q96G01 975 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC34Q96HJ3 373 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 TMEM41AQ96HV5 264 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 RPL10LQ96L21 214 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 GAD1Q99259 594 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 TCF25Q9BQ70 676 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 JPH2Q9BR39 696 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 PAAF1Q9BRP4 392 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CBWD1Q9BRT8 395 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 C17orf80Q9BSJ5 609 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 C1orf43Q9BWL3 253 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 COLEC11Q9BWP8 271 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 STRA6Q9BX79 667 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 SEZ6LQ9BYH1 1024 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms