RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ATP5OP48047 213 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 DHPSP49366 369 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-206ENST00000459895 RAD51Q06609 339 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 NIPAL4Q0D2K0 466 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 SIX1Q15475 284 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-206ENST00000459895 LYSMD4Q5XG99 296 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 LAIR1Q6GTX8 287 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 BZW1Q7L1Q6 419 aaKnown RBP12.96□□□□□ -0.33
COL18A1-206ENST00000459895 LPCAT2Q7L5N7 544 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 ASCL5Q7RTU5 278 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 OR2T34Q8NGX1 318 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 OR14C36Q8NHC7 312 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 ARRDC2Q8TBH0 407 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 SNX19Q92543 992 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-206ENST00000459895 ECHDC3Q96DC8 303 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 AGAP3Q96P47 875 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 CPEB1Q9BZB8 566 aaKnown RBP12.96□□□□□ -0.33
COL18A1-206ENST00000459895 SGK2Q9HBY8 427 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 KCND1Q9NSA2 647 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 ATP8A1Q9Y2Q0 1164 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 SLCO1B1Q9Y6L6 691 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 ABCA7Q8IZY2 2146 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 UPK3BL1B0FP48 263 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 UPK3BL2E5RIL1 263 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 SOCS5O75159 536 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 FGGP02679 453 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 PRKCGP05129 697 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 IGHV4-34P06331 123 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 MMP2P08253 660 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 RBP3P10745 1247 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 NFKB1P19838 968 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 BCL2L1Q07817 233 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 ITKQ08881 620 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 NSUN2Q08J23 767 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 XRCC4Q13426 336 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 GRM3Q14832 879 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 CYP2U1Q7Z449 544 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 ZNF567Q8N184 647 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 SLC35B2Q8TB61 432 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 UBE2Q2Q8WVN8 375 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 TDRD1Q9BXT4 1180 aaKnown RBP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 KLHL8Q9P2G9 620 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 DKK3Q9UBP4 350 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-206ENST00000459895 PCDHGC4Q9Y5F7 938 aa12.95□□□□□ -0.34
COL18A1-206ENST00000459895 LAMA1P25391 3075 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 TMEM131Q92545 1883 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 KCNN4O15554 427 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 LIASO43766 372 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 CEP104O60308 925 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 RHOBTB1O94844 696 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 FSBPO95073 299 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 ITPKAP23677 461 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 CD68P34810 354 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 MMP12P39900 470 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 MPLP40238 635 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 CD86P42081 329 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 GDF10P55107 478 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 GNG11P61952 73 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 SKOR1P84550 965 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 SFSWAPQ12872 951 aaKnown RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 CCDC6Q16204 474 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 CFAP58Q5T655 872 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 PEAR1Q5VY43 1037 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 SEL1L3Q68CR1 1132 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 KIAA0895LQ68EN5 471 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 BRAT1Q6PJG6 821 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 COG1Q8WTW3 980 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 PDCD6IPQ8WUM4 868 aaKnown RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 BIRC7Q96CA5 298 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 ZNF641Q96N77 438 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 OSBPL9Q96SU4 736 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 GORASP1Q9BQQ3 440 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 PCED1AQ9H1Q7 454 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 GBA3Q9H227 469 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 SMOC1Q9H4F8 434 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 SUV39H2Q9H5I1 410 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 PREBQ9HCU5 417 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 HAUS2Q9NVX0 235 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
COL18A1-206ENST00000459895 DNPEPQ9ULA0 475 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 SNX12Q9UMY4 172 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 FADS3Q9Y5Q0 445 aa12.94□□□□□ -0.34
COL18A1-206ENST00000459895 BCLAF3A2AJT9 711 aaKnown RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 LRRC72A6NJI9 287 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 AREL1O15033 823 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 MTSS1O43312 755 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms