RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 BUB1BO60566 1050 aaPredicted RBP20.97■□□□□ 0.95
VARS-218ENST00000459667 KCNK5O95279 499 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 PEX11BO96011 259 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 TNNT1P13805 278 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 CSRP1P21291 193 aaKnown RBP20.97■□□□□ 0.95
VARS-218ENST00000459667 NOVA1P51513 510 aaKnown RBP20.97■□□□□ 0.95
VARS-218ENST00000459667 NSUN2Q08J23 767 aaKnown RBP eCLIP20.97■□□□□ 0.95
VARS-218ENST00000459667 GALNT2Q10471 571 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 STAT4Q14765 748 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 CFAP58Q5T655 872 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 RAD9BQ6WBX8 426 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 TTC7BQ86TV6 843 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 ZSCAN30Q86W11 494 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 CAMK1DQ8IU85 385 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 BBS5Q8N3I7 341 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 MFSD2AQ8NA29 543 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 ZNF641Q96N77 438 aaPredicted RBP20.97■□□□□ 0.95
VARS-218ENST00000459667 SUV39H2Q9H5I1 410 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 ATP13A3Q9H7F0 1226 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 ANKRD36A6QL64 1941 aa20.97■□□□□ 0.95
VARS-218ENST00000459667 TSPAN11A1L157 253 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 UPK3BL1B0FP48 263 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 ZNF487B1APH4 448 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 UPK3BL2E5RIL1 263 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 MAP3K6O95382 1288 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 ZNF883P0CG24 379 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 CD59P13987 128 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 HNRNPA2B1P22626 353 aaKnown RBP20.96■□□□□ 0.95
VARS-218ENST00000459667 XPAP23025 273 aaPredicted RBP20.96■□□□□ 0.95
VARS-218ENST00000459667 SERPINA4P29622 427 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 HSPA9P38646 679 aaKnown RBP20.96■□□□□ 0.95
VARS-218ENST00000459667 GARSP41250 739 aaKnown RBP20.96■□□□□ 0.95
VARS-218ENST00000459667 SCNN1BP51168 640 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 AP1S1P61966 158 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 ODF2Q5BJF6 829 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 PSAPL1Q6NUJ1 521 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 VSIG1Q86XK7 387 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 DEFB124Q8NES8 71 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 HCAR2Q8TDS4 363 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 RNF157Q96PX1 679 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 GOLPH3Q9H4A6 298 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 SLC32A1Q9H598 525 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 FZD3Q9NPG1 666 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 TM7SF3Q9NS93 570 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 DDX56Q9NY93 547 aaKnown RBP20.96■□□□□ 0.95
VARS-218ENST00000459667 CA5BQ9Y2D0 317 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 ALG6Q9Y672 507 aa20.96■□□□□ 0.95
VARS-218ENST00000459667 MED19A0JLT2 244 aaPredicted RBP20.95■□□□□ 0.94
VARS-218ENST00000459667 GOLGA6L3A6NEY3 463 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 C3orf70A6NLC5 250 aaPredicted RBP20.95■□□□□ 0.94
VARS-218ENST00000459667 H0Y8X5 98 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 TLR4O00206 839 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 KCNK3O14649 394 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 AREL1O15033 823 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 TIMP2P16035 220 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 AKT2P31751 481 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 MMP13P45452 471 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 FOXK2Q01167 660 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 BCL2L1Q07817 233 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 ZNF423Q2M1K9 1284 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 MARC1Q5VT66 337 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 BRAT1Q6PJG6 821 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 PIP4P1Q86T03 277 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 IQCHQ86VS3 1027 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 TXLNBQ8N3L3 684 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 TMEM145Q8NBT3 493 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.95■□□□□ 0.94
VARS-218ENST00000459667 SLC17A9Q9BYT1 436 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 GDF3Q9NR23 364 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 REXO2Q9Y3B8 237 aaKnown RBP20.95■□□□□ 0.94
VARS-218ENST00000459667 KNL1Q8NG31 2342 aa20.95■□□□□ 0.94
VARS-218ENST00000459667 CNOT1A5YKK6 2376 aaKnown RBP20.95■□□□□ 0.94
VARS-218ENST00000459667 RCCD1A6NED2 376 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 PSTPIP1O43586 416 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 MAGEC1O60732 1142 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 CCT8P50990 548 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 SUOXP51687 545 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 NXPH1P58417 271 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 GBE1Q04446 702 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 ELP6Q0PNE2 266 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 OVGP1Q12889 678 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 FGL2Q14314 439 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 IFI16Q16666 785 aaKnown RBP20.94■□□□□ 0.94
VARS-218ENST00000459667 TIGD7Q6NT04 549 aaPredicted RBP20.94■□□□□ 0.94
VARS-218ENST00000459667 C11orf63Q6NUN7 778 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 TMEM139Q8IV31 216 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 PGBD5Q8N414 524 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 PAF1Q8N7H5 531 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 ACRBPQ8NEB7 543 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 RNF25Q96BH1 459 aaPredicted RBP20.94■□□□□ 0.94
VARS-218ENST00000459667 MGME1Q9BQP7 344 aa20.94■□□□□ 0.94
VARS-218ENST00000459667 MAK16Q9BXY0 300 aaKnown RBP20.94■□□□□ 0.94
VARS-218ENST00000459667 IGLON5A6NGN9 336 aa20.93■□□□□ 0.94
VARS-218ENST00000459667 APOL1O14791 398 aa20.93■□□□□ 0.94
VARS-218ENST00000459667 GIPC1O14908 333 aa20.93■□□□□ 0.94
VARS-218ENST00000459667 DFNA5O60443 496 aa20.93■□□□□ 0.94
VARS-218ENST00000459667 PAK4O96013 591 aaPredicted RBP20.93■□□□□ 0.94
VARS-218ENST00000459667 CEACAM1P13688 526 aa20.93■□□□□ 0.94
VARS-218ENST00000459667 ITIH2P19823 946 aa20.93■□□□□ 0.94
VARS-218ENST00000459667 CR2P20023 1033 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms