RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DARSP14868 501 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ELNP15502 786 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 F8A1P23610 371 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 HLA-FP30511 346 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SOX5P35711 763 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 EIF4A3P38919 411 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 GARSP41250 739 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TNFSF9P41273 254 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 NEK3P51956 506 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 EEF1A1P68104 462 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 BNC1Q01954 994 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 EEF1A2Q05639 463 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 NAB1Q13506 487 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 FRG1Q14331 258 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 KCNAB1Q14722 419 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 NCF4Q15080 339 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SURF1Q15526 300 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 KYAT1Q16773 422 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SLC9C1Q4G0N8 1177 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 GNASQ5JWF2 1037 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 EEF1A1P5Q5VTE0 462 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TDRD10Q5VZ19 366 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TAF2Q6P1X5 1199 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 GJB7Q6PEY0 223 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 CCDC149Q6ZUS6 474 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ARPINQ7Z6K5 226 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 RASSF3Q86WH2 238 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 WDR49Q8IV35 697 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ARHGEF19Q8IW93 802 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 KIAA2013Q8IYS2 634 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 METTL25Q8N6Q8 603 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 MCOLN3Q8TDD5 553 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TAS1R2Q8TE23 839 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 CASKIN2Q8WXE0 1202 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 THAP11Q96EK4 314 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 APOPT1Q96IL0 206 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF668Q96K58 619 aaPredicted RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 MAGEB18Q96M61 343 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TTC25Q96NG3 672 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 NELL2Q99435 816 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 POP1Q99575 1024 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 C1orf50Q9BV19 199 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TMEM245Q9H330 911 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 GOLPH3Q9H4A6 298 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ATP13A3Q9H7F0 1226 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 PCDH12Q9NPG4 1184 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 XPNPEP3Q9NQH7 507 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 RAB20Q9NX57 234 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 PRKAG2Q9UGJ0 569 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 ENOPH1Q9UHY7 261 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 EIF3LQ9Y262 564 aaKnown RBP6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 MED16Q9Y2X0 877 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 HCN4Q9Y3Q4 1203 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 DTNAQ9Y4J8 743 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SCN1AP35498 2009 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 CFAP99D6REC4 459 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 H3BUI4 141 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 GSC2O15499 205 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 PJA2O43164 708 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 DYRK3O43781 588 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 SLITRK5O94991 958 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 IL18RAPO95256 599 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 VNN1O95497 513 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 PGK1P00558 417 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 APOC1P02654 83 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 THRAP10827 490 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 PDGFRAP16234 1089 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 PTPN1P18031 435 aaKnown RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 NOS3P29474 1203 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 HOXA11P31270 313 aaPredicted RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 SOX6P35712 828 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 BMPR1AP36894 532 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 NPY2RP49146 381 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 OTUD4Q01804 1114 aaKnown RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 GCNT1Q02742 428 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 CENPCQ03188 943 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 PTK2Q05397 1052 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 DRAP1Q14919 205 aaPredicted RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 SLC18A3Q16572 532 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 CYP27C1Q4G0S4 372 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 FAM209BQ5JX69 171 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 C6orf132Q5T0Z8 1188 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 KDELC1Q6UW63 502 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 C16orf54Q6UWD8 224 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 KYAT3Q6YP21 454 aaKnown RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ENOSF1Q7L5Y1 443 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 TTC7BQ86TV6 843 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF354CQ86Y25 554 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ECHDC2Q86YB7 292 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 GLYCTKQ8IVS8 523 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 RCOR2Q8IZ40 523 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ANKLE1Q8NAG6 615 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ST13P5Q8NFI4 369 aaPredicted RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 OR52K1Q8NGK4 314 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 GRK7Q8WTQ7 553 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF296Q8WUU4 475 aaPredicted RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 SHC3Q92529 594 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms